Département Diversité des Communautés et Fonctionnement des Écosystèmes "DCFE"

Le Département DCFE regroupe en son sein 4 équipes dont les compétences permettent de structurer des recherches à partir d’échanges conceptuels et méthodologiques sur la thématique des interrelations biodiversité – structure – fonctionnement des écosystèmes et de leur dynamiques.
Ces échanges sont issus d’une réflexion commune s’appuyant sur une animation scientifique ainsi qu’une mutualisation des équipements et plateaux techniques, toutes deux voulues comme transversales entre les équipes du Département.

Les recherches au sein du Département sont menées à de multiples niveaux d’intégration : des cellules aux écosystèmes, des contraintes environnementales aux dynamiques écologiques et évolutives. Un effort particulier se concentre sur les plateformes de modélisation et simulation, d’analyse physicochimique des stocks et flux de nutriments (carbone, azote, phosphore …) et de microbiologie.

Le Département DCFE se propose de faire émerger plusieurs axes de recherche agrégeant les compétences propres aux équipes :

Lier fonctionnement des réseaux d’interaction, boucle microbienne et fonctions écologiques en découlant (eg. Production primaire, minéralisation, nitrification) ;

Comparer des écosystèmes très différents (écosystèmes aquatiques vs. terrestres, écosystèmes naturels vs. anthropisés (eg. urbains, agrosystèmes)) ;

Analyser l’impact des perturbations naturelles et anthropiques sur les réseaux d’interactions écologiques et en extraire des indicateurs de stabilité (résistance, résilience) ;

Comprendre le rôle des organismes ingénieurs dans ces interactions en s’appuyant sur l’implication forte de différents membres des équipes dans l’association GAIÉ (Groupe d’application de l’ingénierie des écosystèmes) ;

Comprendre le rôle de l’organisation spatiale des populations dans le fonctionnement des réseaux et des écosystèmes aux échelles fines (populations microbiennes), intermédiaires (parcelles, lacs, mésocosmes) et larges (paysage, bassins versants) ;

Croiser demandes sociales et fonctionnement des écosystèmes en traduisant ces concepts en termes de services écosystémiques ;

Analyser les interactions entre biodiversité, dynamique des communautés, fonctionnement des écosystèmes et services écosystémiques.

Équipes du département | Actualités du département | Publications du département | Membres du département | ↑ Revenir en haut de la page

Équipes du département "DCFE"

Biogéographie et Diversité des Interactions du Sol

"BioDIS"

Communautés Microbiennes dans les écosystèmes Continentaux

"CoMiC"

Écologie et Évolution des Réseaux d’Interactions

"EERI"

Écologie intégrative : des Mécanismes aux Services écosystémiques

"EMS"

Équipes du département | Actualités du département | Publications du département | Membres du département | ↑ Revenir en haut de la page

Actualités du département

IRD – La journée mondiale des sols

La Journée mondiale des sols a lieu chaque année le...

Brut nature – Les vers plats, carnivores et invasifs, menacent la France

Cette espèce se cache sous nos pieds et menace l’équilibre...

Le Monde – « Les vers de terre sont des alliés plus précieux que le glyphosate pour la santé de notre planète et de ses habitants »

Alors que la Commission européenne s’apprête à valider ces jours-ci...

Équipes du département | Actualités du département | Publications du département | Membres du département | ↑ Revenir en haut de la page

Publications du département

Ne concerne que les publications de 2017 à aujourd’hui. Pour voir toutes les publications dirigez-vous vers la page Publications.

Référence	Liens	Journal	Equipes et départements
Bécu T.~, Barot S., Lata J-C., Le Roux X., Enjalbert J., Niboyet A.* (available online 19 november 2023) Increasing intraspecific diversity of wheat affects plant nutrient contents but not N recovery in the plant-soil system. Basic and Applied Ecology, 74:24-34	https://doi.org/10.1016/j.baae.2023.11.004	Basic and Applied Ecology	EMS – DCFE
Dubs F., Enjalbert J., Barot S., Porcher E., Allard V., de Vallavielle-Pope C., Gauffreteau A., Niboyet A., Pommier T., Saint-Jean S., Vidal T., Le Roux X. (2023).Unfolding the link between multiple ecosystem services and bundles of functional traits to design multifunctional crop variety mixtures. Agronomy for Sustainable Development, 43:71	https://doi.org/10.1007/s13593-023-00924-6	Agronomy for Sustainable Development	EMS – DCFE
Wang M., Sun X., Cao B., Chiariello N. R., Docherty K. M., Field C. B., Gao Q., Gutknecht J. L. M., Guo X., He G., Hungate B. A., Lei J., Niboyet A.*, Le Roux X., Shi Z., Shu W., Yuan M., Zhou J., & Yang Y. (2023). Long-term elevated precipitation induces grassland soil carbon loss via microbe-plant–soil interplay. Global Change Biology, 29:5429–5444	https://doi.org/10.1111/gcb.16811	Global Change Biology	EMS – DCFE
Dupont L., Brunet C.M.°, Fourcade Y.,James S., Gabriac Q , Coulis M. (2023). Recording earthworm diversity on the tropical island of Martinique using DNA barcoding unveiled endemic species in bromeliad plants. Soil Biology and Biochemistry 182: 109038	https://doi.org/10.1016/j.soilbio.2023.109038	Soil Biology and Biochemistry	BioDIS – DCFE
Dániel-Ferreira, J., Fourcade, Y.*, Bommarco, R., Wissman, J., & Öckinger, E. (2023). Communities in infrastructure habitats are species-rich but only partly support species associated with semi-natural grasslands. Journal of Applied Ecology, 60(5): 837–848, 10.1111/1365-2664.14378	10.1111/1365-2664.14378	journal of applied ecology	BioDIS – DCFE
Chatelain P.~, Elias M., Fontaine C., Villemant C., Dajoz I., Perrard A. (2023)Müllerian mimicry among bees and wasps:a review of current knowledge and futureavenues of research. Biological Reviews. In Press. 10.1111/brv.12955	10.1111/brv.12955	biological reviews	EERI – DCFE
Lajeunesse, A., & Fourcade, Y. (2023). Temporal analysis of GBIF data reveals the restructuring of communities following climate change. Journal of Animal Ecology, 92(2), 391–402, 10.1111/1365-2656.13854	10.1111/1365-2656.13854 🔗 HAL 🔗 pdf	journal of animal ecology	BioDIS – DCFE
Fourcade, Y.*, & Alhajeri, B. H. (2023). Environmental correlates of body size influence range size and extinction risk: A global study in rodents. Global Ecology and Biogeography, 32(2), 206–217, 10.1111/geb.13622	10.1111/geb.13622 🔗 HAL 🔗 pdf	global ecology and biogeography	BioDIS – DCFE
Gineyts R.°, Niboyet A.*(2023) Nitrification, denitrification, and related functional genes under elevated CO2: a meta-analysis in terrestrial ecosystems. Global Change Biology, 29:1839-1853, 10.1111/gcb.16568	10.1111/gcb.16568 🔗 HAL	Global Change Biology	EMS – DCFE
Colombini G., Rumpel C., Houot S., Biron P., Dignac M.–F*. (2022) A long-term field experiment reveals the accumulation of high amounts of microplastics in soils amended with composted waste residues. Environmental Pollution, 315:120369	10.1016/j.envpol.2022.120369 🔗 HAL	Environmental Pollution	CoMiC – DCFE ; EMS – DCFE ; FEST – Sols_ZC
Barranger A., Klopp C., Le Bot B., Saramito G., Dupont L.*, Llopis S., Wiegand C., Binet,F., 2023. Insights into the molecular mechanisms of pesticide tolerance in the Aporrectodea caliginosa earthworm. Environmental Pollution 319 : 120945	https://doi.org/10.1016/j.envpol.2022.120945 🔗 HAL 🔗 pdf	Environmental Pollution	BioDIS – DCFE
Souliyavongsa, X., Pierret, A., Trelo-ges, V., Ayutthaya, S.I.N., Sayavong, S., Hartmann, C., 2022. Does forest conversion to tree plantations affect properties of subsoil horizons? Findings from mainland Southeast Asia (Lao PDR, Yunnan-China). Geoderma Regional 28, e00457	10.1016/j.geodrs.2021.e00457	Geoderma Regional	BioDIS – DCFE ; CoMiC – DCFE ; EERI – DCFE ; EMS – DCFE
Erktan, A., Coq, S., Blanchart, E., Chevallier, T., Trap, J., Bernard, L., Nahmani, J., Hartmann, C., Hedde, M., Ganaulat, P., Barot, S., Cortet, J. and, 2022. Biodiversité et structure physique des sols : une vision spatialisée du fonctionnement des sols. Etude et Gestion des Sols 29, 153–167.		Etude et Gestion des Sols	BioDIS – DCFE ; CoMiC – DCFE ; EERI – DCFE ; EMS – DCFE ; EPE – EcoEvo ; F2ZC – Sols_ZC ; FEST – Sols_ZC
van Moorsel S. J., Thébault E.*, Radchuk V., Narwani A., Montoya J. M., Dakos V., Holmes M., De Laender F., Pennekamp F. (2022) Predicting effects of multiple interacting global change drivers across trophic levels. Global Change Biology	10.1111/gcb.16548	global change biology	EERI – DCFE
Rohr, R. P. & Loeuille, N.* (2021) Effects of evolution on niche displacement and emergent population properties, a discussion on optimality. Oikos bioarxiv	10.1111/oik.09472	Oikos	EERI – DCFE
Berne, O; Agier, L; Hardy, A; Lellouch, E; Aumont, O; Mariette, J; Ben-Ari, T* (2022) Environmental Research Letters. 17 (12)	10.1088/1748-9326/ac9b51 🔗 HAL 🔗 pdf	Environmental Research Letters	EMS – DCFE
Le Mer G~, Bottinelli N, Dignac M-F, Capowiez Y, Bouquet P, Mazurier A, Baudin F, Caner L, Rumpel C* 2022. Exploring the control of earthworm cast macro- and micro-scale features on soil organic carbon mineralization across species and ecological categories. Geoderma, 427:116151	10.1016/j.geoderma.2022.116151 🔗 HAL	Geoderma	CoMiC – DCFE ; FEST – Sols_ZC
Planas-Sitjà I., Monnin T., Loeuille N., Cronin A.L. (2022) To disperse or compete? Coevolution of traits leads to a limited number of reproductive strategies. bioRxiv	10.1101/2022.11.27.518112 🔗 HAL	BioRxiv	EERI – DCFE ; ESEAE – EcoEvo
Valdovinos F.S., Hale K.R., Dritz S., Glaum P.R., McCann K.S., Simon S.M., Thébault E.*, Wetzel W.C., Wootton K.L., Yeakel J.D. (2022) A bioenergetic framework for aboveground terrestrial food webs. Trends in Ecology & Evolution	10.1016/j.tree.2022.11.004	Trends in Ecology & Evolution	EERI – DCFE
Roturier S., Picard, J., Cogos, S., Spataro T. *(2022) Influence of prescribed burning on reindeer winter pastures at landscape scale in northern Sweden: A modelling approach. Ambio	10.1007/s13280-022-01805-0	Ambio	EERI – DCFE
Changey F.^, Aissaoui G., Plain C., Ranger J., Legout A., Zeller B., Epron D., Lerch T.Z.* (2022) Prolonged effect of forest soil compaction on methanogen and methanotroph seasonal dynamics. Microbial Ecology	10.1007/s00248-022-02149-8	Microbial Ecology	BioDIS – DCFE
Kläy, L.~, Girardin, L., Calvez, V., Débarre, F.* (2022). Pulled, pushed or failed: the demographic impact of a gene drive can change the nature of its spatial spread. arXiv preprint arXiv:2210.13935	10.48550/arXiv.2210.13935 🔗 HAL 🔗 pdf	arxiv	EERI – DCFE
Gignoux, J.*, Davies, I.D. & Flint, S.R. 2022. 3Worlds, a simulation platform for ecosystem modelling. Ecological Modelling 473:110121	10.1016/j.ecolmodel.2022.110121 🔗 HAL 🔗 pdf	Ecological Modelling	EMS – DCFE
Charberet S.~, Maria A., Siaussat D., Gounand I., and Mathieu J. (2022) Feeding and growth variation affectdelta13C and delta 15N budgets during ontogeny in a lepidopterian larva. bioRxiv pre-print	10.1101/2022.11.09.515573v1	bioRxiv	CReA – EcoSens ; EERI – DCFE
Fauviau A, Baude M, Bazin N, Fiordaliso W, Fisogni A , Fortel L , Garrigue J, Geslin B, Goulnik J Guilbaud L , Hautekèete N , Heiniger C, Kuhlmann M, Lambert O, Langlois D, Le Féon V , Lopez Vaamonde C,Maillet G , Massol F, Michel N, Michelot Antalik A , Michez D, Mouret H, Piquot Y, Potts , S; G, Roberts S, Ropars L, Schurr L, Van Reeth C , Villalta I, Zaninotto V , Dajoz I , Henry M. 2022. A large scale dataset reveals taxonomic and functional specificities of wild bee communities in urban habitats of Western Europe. Scientific Reports, 12, 18866	10.1038/s41598-022-21512-w 🔗 HAL 🔗 pdf	Scientific Reports	EERI – DCFE
Gergonne D.~, Fougeyrollas R., Poteaux C., Roisin Y., Armbrecht I., Šobotník J., Romero C. S. V., Berthier J. M., Sillam-Dussès D., Roy V.* (2022). The phylogeography of some soil-feeding termites shaped by the Andes. Organisms Diversity & Evolution	10.1007/s13127-022-00594-4	Organisms Diversity & Evolution	BioDIS – DCFE
Lang L., Sebilo M.*, Bounouba M., Dubos S. & Spérandio M. (2022).Long term analysis of N2O emission from partial nitritation anammox process under oxygen limitation. Bioressource Technology Reports	10.1016/j.biteb.2022.101224 🔗 HAL	Bioresource Technology Reports	EMS – DCFE
Shi, A., Nunan, N*., Figueira, J., Herrmann, A.M., Wetterlind, J., 2022. Long-term ley and manure managements have consistent effects on microbial functional profiles and organic C groups across soils from a latitudinal gradient. Agron. Sustain. Dev. 42, 107	10.1007/s13593-022-00837-w 🔗 HAL 🔗 pdf	Agronomy for Sustainable Development	BioDIS – DCFE
Dolejšová K., Křivánek J., Štáfková J., Horáček N., Havlíčková J., Roy V.*, Kalinová B., Roy A., Kyjaková P. & Hanus R. (2022). Identification of a queen primer pheromone in higher termites. Communications Biology, 5, 1165	10.1038/s42003-022-04163-5 🔗 HAL	Communications Biology	BioDIS – DCFE
Traoré, A. S.~’, K. I. Kouassi’, M. Koné’, J. Gignoux, and S. Barot. 2022. Spatial patterns of a savanna palm tree Borassus aethiopumand its temporal variability. Journal of Plant Ecology 15:1049–1064.	10.1093/jpe/rtac029 🔗 HAL 🔗 pdf	Journal of Plant Ecology	EMS – DCFE
Védère C, Lebrun M, Honvault N, Aubertin M-L, Girardin C, Garnier P, Dignac M-F, Houben D, Rumpel C 2022. How does soil water status influence the fate of soil organic matter? A review of processes across scales. Earth Science Reviews, 234:104214	10.1016/j.earscirev.2022.104214 🔗 HAL	Earth Science Reviews	CoMiC – DCFE ; FEST – Sols_ZC
Roy V., Ventura M., Fourcade Y., Justine J.-L., Gigon A., Dupont L. (2022) Gut content metabarcoding and citizen science reveal the earthworm prey of the exotic terrestrial flatworm, Obama nungara. European Journal of Soil Biology, 113: 103449,	10.1016/j.ejsobi.2022.103449 🔗 HAL 🔗 pdf	European Journal of Soil Biology	BioDIS – DCFE
Eschenbrenner J.~, Thébault, E.* (2022). Diversity, food web structure and the temporal stability of total plant and animal biomasses. Oikos, e08769.	10.1111/oik.08769 🔗 HAL 🔗 pdf	oikos	EERI – DCFE
Védère C., Lebrun M., Biron P ., Planchais S., Bordenave Jacquemin M., Honvault N., Firmin S., Savouré A., Houben D., Rumpel C. (2022). The older, the better: Ageing improves the efficiency of biochar-compost mixture to alleviate drought stress in plant and soil. Science of The Total Environment. 856	10.1016/j.scitotenv.2022.158920 🔗 HAL	Science of The Total Environment	APCE – IPE ; EMS – DCFE ; FEST – Sols_ZC
Lepori, V. J., Loeuille, N.* & Rohr, R. (2022) Robustness vs productivity during evolutionary community assembly: short-term synergies and long-term trade-offs. bioarxiv	10.1101/2022.10.14.512255	bioarxiv	EERI – DCFE
Dignac M.-F*., Maurin C. (2022) La construction d’un collectif scientifique créatif et bienveillant par la mobilisation des émotions et des sens à travers les liens sciences-art : le Réseau Matières Organiques. Etude et Gestion des sols 30, 19-31.	🔗 HAL 🔗 pdf	Etude et Gestion des sols	CoMiC – DCFE
Javati S, Guernier-Cambert V*, Jonduo M, Robby S, Kimopa J, Maure T, McBryde ES, Pomat W, Aplin K, Helgen KM, Abdad MY, Horwood PF. Diversity of Leptospira spp. in bats and rodents from Papua New Guinea. Transbound Emerg Dis. 2022 Oct 5.	10.1111/tbed.14725 🔗 HAL	Transboundary and Emerging Diseases	CoMiC – DCFE
Gallet A. Yao E.K., Foucault P., Bernard C., Quiblier C., Humbert J.F., Coulibaly J.K., Troussellier M., Marie M., Duperron S. (2022) Fish gut-associated bacterial communities in a tropical lagoon (Aghien lagoon, Ivory Coast). Frontiers in Microbiology13, 963456	10.3389/fmicb.2022.963456 🔗 HAL 🔗 pdf	Frontiers in Microbiology	CoMiC – DCFE
Coq S, Ganault P, Le Mer G~, Nahmani J, Capowiez Y, Dignac M-F, Rumpel C, Joly F-X 2022. Faeces traits as unifying predictors of detritivore effects on organic matter turnover. Geoderma 422, 115940.	10.1016/j.geoderma.2022.115940 🔗 HAL	Geoderma	CoMiC – DCFE ; FEST – Sols_ZC
Parra S. A.°, Thébault E., Fontaine C., Dakos V. (2022). Interaction fidelity is less common than expected in plant–pollinator communities. Journal of Animal Ecology, 91(9), 1842-1854.	10.1111/1365-2656.13762 🔗 HAL 🔗 pdf	journal of animal ecology	EERI – DCFE
Crochard L., Julliard R., Gaba S., Bretagnolle V., Baude M.*, Fontaine C. (2022) Weeds from non-flowering crops as potential contributors to oilseed rape pollination, Agriculture, Ecosystems & Environment, 336, 108026.	10.1016/j.agee.2022.108026 🔗 HAL	Agriculture Ecosystems & Environment	EERI – DCFE
Koffi KF. ~, N’Dri A. `, Srikanthasamy T. ~, Lata JC. , Konaté S. `, Konan M. `, Barot S. (2022) The Demographic Response of Grass Species to Fire Treatments in a Guinean Savanna. Fire 5 (6), 193	10.3390/fire5060193	Fire	EMS – DCFE
Amarsy, R., Fournier, S., Trystram, D., Monteil, C., Raynaud, X.*, Jarlier, V., & Robert, J. 2022. Decrease of hospital- and community-acquired bloodstream infections due to Streptococcus pneumoniae and Streptococcus pyogenes during the first year of the COVID-19 pandemic: a time-series analysis in Paris region. American Journal of Infection Control 0:	10.1016/j.ajic.2022.09.002 🔗 HAL	American Journal of Infection Control	EMS – DCFE
Débarre, F.*, Lecoeur, E., Guimier, L., Jauffret-Roustide, M., & Jannot, A. S. (2022). The French Covid-19 vaccination policy did not solve vaccination inequities: a nationwide study on 64.5 million people. European journal of public health, 32(5), 825-830	10.1093/eurpub/ckac125 🔗 HAL 🔗 pdf	European journal of public health	EERI – DCFE
Maris, V. & Beau, R.* (2022) Le retour du sauvage – Une question de nature et de temps. Revue forestière française 73, 281–292.	10.20870/revforfr.2021.5416	Revue forestière française	EMS – DCFE
C.E. Morris, C. Lacroix, C. Chandeysson, C. Guilbaud, C. Monteil, S. Piry, E. Rochelle Newall, S. Fiorini, F. Van Gijsegem, M.A. Barny*, O. Berge. Comparative seasonal abundance and diversity of populations of the Pseudomonas syringae and Soft Rot Pectobacteriaceae species complexes throughout the Durance River catchment from its French Alps sources to its delta	10.1101/2022.09.06.506731 🔗 HAL 🔗 pdf	BioRxiv	CoMiC – DCFE
Beau R.*, (2022) Champs et friches : réflexions sur l’ordinaire de la nature. Critique, vol.903‑904, n°8‑9, 2022, p. 746‑756.	10.3917/criti.903.0746 🔗 HAL 🔗 pdf	Critique	EMS – DCFE
Védère, C.^, Vieublé Gonod, L., Nunan, N.*, Chenu, C., 2022. Opportunities and limits in imaging microorganisms and their activities in soil microhabitats. Soil Biology and Biochemistry 174, 108807	10.1016/j.soilbio.2022.108807 🔗 HAL 🔗 pdf	Soil Biology & Biochemistry	BioDIS – DCFE
Dufour, L.J.P.,° Herrmann, A.M., Leloup, J., Przybylski, C., Foti, L.~, Abbadie, L., Nunan, N.*, 2022. Potential energetic return on investment positively correlated with overall soil microbial activity. Soil Biology and Biochemistry 173, 108800	10.1016/j.soilbio.2022.108800 🔗 HAL 🔗 pdf	Soil Biology & Biochemistry	BioDIS – DCFE ; EMS – DCFE
Leibold, M. A., Govaert, L., Loeuille, N.*, de Meester, L. & Urban, M. C. (2022) Evolution and community assembly across spatial scales. Annual Reviews of Ecology, Evolution and Systematics, 53:14.1–14.28	10.1146/annurev-ecolsys-102220-024934	Annual Review of Ecology Evolution and Systematics	EERI – DCFE
Jeannerod L, Carlier A, Schatz B, Daise C, Richel A, Agnan Y,Baude M*, Jacquemart AL. (2022) Some bee-pollinated plants provide nutritionally incomplete pollen amino acid resources to their pollinators. PLOS ONE 17(8): e0269992.	10.1371/journal.pone.0269992	PLoS One	EERI – DCFE
Villalta I., Bouget C., Lopez-Vaamonde C., Baude M.*, Phylogenetic, functional and taxonomic responses of wild bee communities along urbanisation gradients, (2022) Science of The Total Environment, 832, 154926.	10.1016/j.scitotenv.2022.154926 🔗 HAL	Science of the Total Environment	EERI – DCFE
Mathieu, J., Antunes, A. C., Barot, S., Bonato Asato, A. E. ., Bartz, M. L. C. ., Brown, G. G., Calderon-Sanou, I., Decaëns, T., Fonte, S. J., Ganault, P., Gauzens, B., Gongalsky, K. B., Guerra, C. A., Hengl, T., Lavelle, P., Marichal, R., Mehring, H., Peña-Venegas, C. P., Castro, D., Potapov, A., Thébault, E.*, Thuiller, W., Witjes, M., Zhang, C., & Eisenhauer, N. (2022). sOilFauna – a global synthesis effort on the drivers of soil macrofauna communities and functioning: WORKSHOP REPORT . SOIL ORGANISMS, 94(2), 111–126.	10.25674/so94iss2id282 🔗 HAL 🔗 pdf	SOIL ORGANISMS	EERI – DCFE ; EMS – DCFE
Ben Moussa H, Bertrand C^, Rochelle-Newall E, Fiorini S, Pédron J, Barny MA (2022) The Diversity and Abundance of Soft Rot Pectobacteriaceae Along the Durance River Stream in the Southeast of France Revealed by Multiple Seasonal Surveys. Phytopathology, 112(8):1676-1685.	10.1094/phyto-12-21-0515-r 🔗 HAL 🔗 pdf	Phytopathology	CoMiC – DCFE
Ma X., T Wang, Z. Shi, N. R. Chiariello, K. M. Docherty, C. B. Field, J. L. M. Gutknecht, Q. Gao, Y. Gu, X. Guo, B. A. Hungate, J. Lei, A. Niboyet*, X. Le Roux, M. Yuan, T. Yuan, J. Zhou, and Y. Yang (2022). Long-term nitrogen deposition enhances microbial capacities in soil carbon stabilization but reduces network complexity. Microbiome, 10:112	10.1186/s40168-022-01309-9 🔗 HAL 🔗 pdf	Microbiome	EMS – DCFE
Olokotum M., Humbert J.F.*, Quiblier C., Okello W., Semyalo R., Troussellier M., Marie B., Baumann K., Kurmayer R., Bernard C. (2022) Characterization of Potential Threats from CyanobacterialToxins in Lake Victoria Embayments and during Water Treatment. Toxins 14, 664	10.3390/toxins14100664 🔗 HAL 🔗 pdf	Toxins	CoMiC – DCFE
Rojas E., Gouret M., Agostini S., FioriniS., LacroixG.*, FonsecaP., MédocV. (2022). From behaviour to complex communities: Resilience to anthropogenic noise in a fish-induced trophic cascade.bioRxiv	10.1101/2022.07.05.498792 🔗 HAL	bioRxiv	EERI – DCFE
Augusto Zanella, Jean-François Ponge, Bernard Jabiol, Bas Van Delft, Rein De Waal, Klaus Katzensteiner, Eckart Kolb, Nicolas Bernier, Giacomo Mei, Manuel Blouin, Jérôme Juilleret, Noémie Pousse, Silvia Stanchi, Fernando Cesario, Renée-Claire Le Bayon, Dylan Tatti, Silvia Chersich, Luca Carollo, Michael Englisch, Anna Schrötter, Judith Schaufler, Eleonora Bonifacio, Ines Fritz, Adriano Sofo, Stéphane Bazot, Jean-Christophe Lata *, Jean-François Iffly, Carlos E Wetzel, Christophe Hissler, Ginevra Fabiani, Michael Aubert, Andrea Vacca, Gianluca Serra, Cristina Menta, Francesca Visentin, Nathalie Cools, Cristian Bolzonella, Lorenzo Frizzera, Roberto Zampedri, Mauro Tomasi, Paola Galvan, Przemyslaw Charzynski, Elina Zakharchenko, Seyed Mohammad Waez-Mousavi, Jean-Jacques Brun, Roberto Menardi, Fausto Fontanella, Nicola Zaminato, Silvio Carollo, Alessio Brandolese, Michele Bertelle, Gaétan Zanella, Thomas Bronner, Ulfert Graefe, Herbert Hager. (2022) A standardized morpho-functional classification of the planet’s humipedons. Soil Systems 6 (3), 59,	10.3390/soilsystems6030059 🔗 HAL 🔗 pdf	Soil Systems	EMS – DCFE
Suvannang N`, Hartmann C, Iwai Chuleemas B`, Jaiarree S`, Daungkamol K`, Polsrakhu P`, Sukchan S`, Sapet A`, Pierret A, Brauman A, Hammecker C, Robain H* (2022) Soil priorities: Opportunities and challenges in Thailand. Geoderma Regional, 30 (2022) : e00536	10.1016/j.geodrs.2022.e00536 🔗 HAL	Geoderma Regional	BioDIS – DCFE ; CoMiC – DCFE ; F2ZC – Sols_ZC
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Justine J.-L., Marie A. D., Gastineau R., Fourcade Y.*, Winsor L. (2022) The invasive land flatworm Obama nungara in La Réunion, a French island in the Indian Ocean, the first report of the species for Africa. Zootaxa, 5154: 469 476	10.11646/zootaxa.5154.4.4 🔗 HAL 🔗 pdf	Zootaxa	BioDIS – DCFE
Royer G., Dixit Z., Pédron J., Pierrat G., Demontant V., Berçot B., Rodriguez C., Barny MA., Jacquier H, Woerther PL (2022) Genetic and Phenotypic Study of the Pectobacterium versatile Beta-Lactamase, the Enzyme Most Similar to the Plasmid-Encoded TEM-1. Applied and Environmental Microbiology, 88(11):e0022022.	10.1128/aem.00220-22	APPLIED AND ENVIRONMENTAL MICROBIOLOGY	CoMiC – DCFE
Ahoutou M.A., Yao E.K., Djeha R., Kone M., Tambosco K., Duval C., Hamlaoui S., Bernard C., Bouvy M., Marie B., Montuelle B., Troussellier M., Konan F.K., Coulibaly J.C., Dosso M., Humbert J.F.*, Quiblier C. (2021) Impacts of nutrient loading and fish grazing on the phytoplankton community and cyanotoxin production in a shallow tropical lake: Results from mesocosm experiments. MicrobiologyOpen 1, e1278	10.1002/mbo3.1278 🔗 HAL 🔗 pdf	MicrobiologyOpen	CoMiC – DCFE
Mitroi V.^, Deroubaix J.F., Tall Y., Ahi K.C., Humbert J.F.* (2022) Rendre compte de la dégradation des milieux aquatiques. Le rôle des savoirs dans la mise en place des politiques de protection des ressources en eau en Afrique subsaharienne. Geocarrefour 96, 1	10.4000/geocarrefour.19353 🔗 HAL 🔗 pdf	Geocarrefour	CoMiC – DCFE
Coughlan N. E., DickeyJ. W. E., DickJ. T. A., Médoc V., McCard M., Lacroix G.*, Fiorini S., Millot A., Cuthbert R. N. (2022) When worlds collide: Invader-driven benthic habitat complexity alters predatory impacts of invasive and native predatory fishes. Science of the Total Environment, 843: 156876	10.1016/j.scitotenv.2022.156876 🔗 HAL	Science of the Total Environment	EERI – DCFE
Changey F.^, Nunan N., Herrmann A.M., Lerch T.Z. (2022) Catching change in microbial diversity indicators under different soil organic matter managements: Higher taxonomic resolution, better discrimination? Ecological,Indicators, 139, 108897	10.1016/j.ecolind.2022.108897 🔗 HAL 🔗 pdf	Ecological Indicators	BioDIS – DCFE
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Loranger-Merciris G., Ozier-Lafontaine H., Diman J.-L., Sierra J., Lavelle P.* (2022) Fast improvement of macrofauna communities and soil quality in plantain crops converted to agroecological practices. Pedobiologia-Journal of soil ecology, 93-94 : 150823	10.1016/j.pedobi.2022.150823 🔗 HAL	Pedobiologia	BioDIS – DCFE
Toulzac, M.°, Methlouthi, M.°, & Perrard, A.*2022. Soda maker for field anesthesia as a step towards a non-lethal identification of wild bees and other flower visitors.OSMIA 10: 25-34.	10.47446/OSMIA10.3 🔗 HAL 🔗 pdf	OSMIA	EERI – DCFE
Le, N. D.`, T. T. H. Hoang`, V. P. Phung`, T. L. Nguyen`, E. Rochelle-Newall*, T. T. Duong`, T. M. H. Pham`, T. X. B. Phung`, T. D. Nguyen`, P. T. Le`, L. A. Pham`, T. A. H. Nguyen` and T. P. Q. Le` (2022). “Evaluation of heavy metal contamination in the coastal aquaculture zone of the Red River Delta (Vietnam).” Chemosphere 303: 134952	10.1016/j.chemosphere.2022.134952	Chemosphere	CoMiC – DCFE
Pongmala, K.~, A. Pierret, P. Oliva, A. Pando, V. Davong`, S. Rattanavong`, N. Silvera, M. Luangraj`, L. Boithias, K. Xayyathip` L. Menjot, M. Macouin, E. Rochelle-Newall, H. Robain*, A. Vongvixay`, A. J. H. Simpson, D. A. B. Dance and O. Ribolzi (2022). “Distribution of Burkholderia pseudomallei within a 300-cm deep soil profile: implications for environmental sampling.” Scientific Reports 12(1): 8674.	10.1038/s41598-022-12795-0	Scientific Reports	BioDIS – DCFE ; CoMiC – DCFE ; F2ZC – Sols_ZC
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Boubacar Moussa, M., A. Abdourhamane Touré`, L. Kergoat, B. Lartiges, E. Rochelle-Newall*, E. Robert, M. Gosset, B. Alkali Tanimoun` and M. Grippa (2022). “Spatio-temporal dynamics of suspended particulate matter in the middle Niger River using in-situ and satellite radiometric measurements.” Journal of Hydrology: Regional Studies 41: 101106.	10.1016/j.ejrh.2022.101106 🔗 HAL 🔗 pdf	SOIL BIOLOGY & BIOCHEMISTRY	CoMiC – DCFE
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Rocci, K.S., Barker, K.S., Seabloom, E.W., Borer, E.T., Hobbie, S.E., Bakker, J.D., MacDougall, A.S., McCulley, R.L., Moore, J.L., Raynaud, X., Stevens, C.J., Cotrufo, M.F., 2022. Impacts of nutrient addition on soil carbon and nitrogen stoichiometry and stability in globally-distributed grasslands. Biogeochemistry.	10.1007/s10533-022-00932-w 🔗 HAL 🔗 pdf	Biogeochemistry	EMS – DCFE
Pédron J, van der Wolf JM, Portier P, Caullireau E, Van Gijsegem F (2022) The Broad Host Range Plant Pathogen Dickeya dianthicola Shows a High Genetic Diversity. Microorganisms, 10(5):1024.	10.3390/microorganisms10051024 🔗 HAL 🔗 pdf	Microorganisms	CoMiC – DCFE
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Lefebvre T, Charles-Dominique T*, Tomlinson KW. 2022. Trunk spines of trees: a physical defence against bark removal and climbing by mammals? Annals of Botany 5: 541-554.	10.1093/aob/mcac025 🔗 HAL 🔗 pdf	Annals of Botany	EMS – DCFE
Zaninotto V.~, Dajoz I.* (2022) Keeping up with Insect Pollinators in Paris. Animals, 12(7):923,	10.3390/ani12070923 🔗 HAL 🔗 pdf	Animals	EERI – DCFE
Srikanthasamy, T.~ , S. Barot , F. K. Koffi ~`, K. Tambosco, Y. Marcangeli , D. Carmignac, A. B. N’Dri`, J. Gervaix`, J. Leloup, X. Le Roux, and J.-C. Lata*. 2022. Effects of vegetation cover and season on soil nitrifiers in an African savanna: Evidence of archaeal nitrifier inhibition by grasses. Geoderma 115775.	10.1016/j.geoderma.2022.115775 🔗 HAL	Geoderma	EMS – DCFE
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Lata, J.-C., X. Le Roux, K. F. Koffi` `~, L. Yé `~, T. Srikanthasamy ~, S. Konaré `~, and S. Barot. 2022. The causes of the selection of Biological Nitrification Inhibition (BNI) in relation to ecosystem functioning, and a research agenda to explore them. Biology and Fertility of Soils in press.	10.1007/s00374-022-01630-3 🔗 HAL	Biology and Fertility of Soils	EMS – DCFE
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Roturier, S. & Beau, R.* Digital technologies and ILK in the Arctic: In search of epistemological pluralism. Environmental Science & Policy 133, 164–171 (2022).	10.1016/j.envsci.2022.03.025 🔗 HAL 🔗 pdf	Environmental Science & Policy	EMS – DCFE
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Arditi R.^ (2022) Une offensive antisémite de Radio-Paris contre le ministère de l’Agriculture de Vichy. Guerres mondiales et conflits contemporains, 285: 97–108	10.3917/gmcc.285.0097	Guerres mondiales et conflits contemporains	EERI – DCFE
Yacine, Y~ & Loeuille, N.* (2022) Stable coexistence in plant-pollinator-herbivore communities requires balanced mutualistic vs antagonistic interactions. Ecol. Mod.	10.1016/j.ecolmodel.2021.109857	Ecological Modelling	EERI – DCFE
Poblete-Grant P., Cartes P., Pontigo S., Biron P., de la Luz Mora M., Rumpel C. (2022) Phosphorus fertiliser form determined the allocation of root-derived organic carbon to soil organic matter fractions. Soil Biology and Biochemistry.	10.1016/j.soilbio.2022.108614	SOIL BIOLOGY & BIOCHEMISTRY	EMS – DCFE ; FEST – Sols_ZC
Fiard M., Cuny P., Hubas C., Jézéquel R., Lamy D.*, Walcker R., El Houssainy A., Heimbürger-Boavida L-E., Robinet T., Bihannic I., Gilbert F., Michaud E., Dirberg G., Militon C. (2022) Mangrove microbiota along the urban-to-rural gradient of the Cayenne estuary (French Guiana, SOuth America) : Drivers and potential bioindicators. Science of The Total Environment, 807, 150667	10.1016/j.scitotenv.2021.150667	Science of the Total Environment	CoMiC – DCFE
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Fourcade, Y.,* Winsor, L., & Justine, J.-L. (2022). Hammerhead worms everywhere ? Modelling the invasion of bipaliin flatworms in a changing climate. Diversity and Distributions, 28: 844-858.	10.1111/ddi.13489 🔗 HAL 🔗 pdf	DIVERSITY AND DISTRIBUTIONS	BioDIS – DCFE
Sonntag, S.°, & Fourcade, Y.* (2022). Where will species on the move go? Insights from climate connectivity modelling across European terrestrial habitats. Journal for Nature Conservation, 66, 126139	10.1016/j.jnc.2022.126139 🔗 HAL	Journal for Nature Conservation	BioDIS – DCFE
Menghao Zhang, Pascal Jouquet, Jun Dai, Ling Xiao, Yan Du, Kexue Liu, Mikael Motelica-Heino, Patrick Lavelle, Hesen Zhong, Chi Zhang. (2022). Assessment of bioremediation potential of metal contaminated soils (Cu, Cd, Pb and Zn) by earthworms from their tolerance, accumulation and impact on metal activation and soil quality: A case study in South China. Science of The Total Environment, 152834	10.1016/j.scitotenv.2021.152834 🔗 HAL 🔗 pdf	Science of the Total Environment	BioDIS – DCFE ; FEST – Sols_ZC
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FOUCAULT P., GALLET A., DUVAL C., MARIE B., DUPERRON S. (2022). Gut microbiota and holobiont metabolome composition of the medaka fish (Oryzias latipes) are affected by a short exposure to the cyanobacterium Microcystis aeruginosa. Aquatic Toxicology, 253	https://doi.org/10.1016/j.aquatox.2022.106329 🔗 HAL	Aquatic Toxicology	DCFE
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MARIETTE J., BLANCHARD O., BERNE O., AUMONT O., CARREY J., LIGOZAT A.-L., LELLOUCH E., ROCHE P.-E., GUENNEBAUD G., THANWERDAS J., BARDOU P., SALIN G., MAIGNE E., SERVAN S., BEN-ARI T. (2022-09-08). An open-source tool to assess the carbon footprint of research. Environmental Research: Infrastructure and Sustainability, 2 (3), 035008	https://doi.org/10.1088/2634-4505/ac84a4 🔗 HAL	Environmental Research: Infrastructure and Sustainability	DCFE
Girardin, L., Débarre, F.* (2021). Demographic feedbacks can hamper the spatial spread of a gene drive. Journal of Mathematical Biology, 83(6), 1-33	10.1007/s00285-021-01702-2 🔗 HAL 🔗 pdf	Journal of Mathematical Biology	EERI – DCFE
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Ferry N, Dray S, Fritz H, Ipavec A, Wigley BJ, Charles‐Dominique T*, Bourgarel M, Sebele L, Valeix M. 2021. Long‐term high densities of African elephants clear the understorey and promote a new stable savanna woodland community. Journal of Vegetation Science, 32(6), p.e13101.	10.1111/jvs.13101 🔗 HAL	Journal of Vegetation Science	EMS – DCFE
Yacine, Y.~ & Loeuille, N.* (2021) Attracting pollinators vs escaping herbivores: eco-evolutionary dynamics of plants confronted with an ecological trade-off. Bioarxiv	10.1101/2021.12.02.470900	bioarxiv	EERI – DCFE
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Cortier, T.° & Loeuille, N.* (2021) On eco-evolutionary dynamics of phenologies in competitive communities and their robustness to climate change. Bioarxiv	10.1101/2021.12.01.470711	bioarxiv	EERI – DCFE
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Danet A., Mouchet M., Bonnaffé W., Thébault E.*, Fontaine C. (2021) Species richness and food-web structure jointly drive community biomass and its temporal stability in fish communities. Ecology Letters, 24: 2364-2377	10.1111/ele.13857 🔗 HAL 🔗 pdf	Ecology Letters	EERI – DCFE
Chiminazzo M.A., Bombo A.B., Charles‐Dominique T.*, Fidelis A. 2021. Your best buds are worth protecting: Variation in bud protection in a fire‐prone cerrado system. Functional Ecology	10.1111/1365-2435.13907 🔗 HAL	Functional Ecology	EMS – DCFE
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Fourcade Y.* (2021) Fine-tuning niche models matters in invasion ecology. A lesson from the land planarian Obama nungara. Ecological Modelling, 457: 109686	10.1016/j.ecolmodel.2021.109686 🔗 HAL 🔗 pdf	Ecological Modelling	BioDIS – DCFE
Hajar Ben Moussa~, Jacques Pédron, Claire Bertrand°, Amandine Hecquet° and Marie-Anne Barny (2022) Pectobacterium quasiaquaticum sp. nov., isolated from waterways. International Journal of systematic and evolutionary microbiology	10.1099/ijsem.0.005042 🔗 HAL 🔗 pdf	International Journal of systematic and evolutionary microbiology	CoMiC – DCFE
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Iry Andrianjara~, Marianne Bordenave-Jacquemin, Virginie Roy, Cécile Cabassa, Pierre Federici, David Carmignac, Yoan Marcangeli, Germinal Rouhan, Mathilde Renard, François Nold, Jean-Christophe Lata, Patricia Genet, Séverine Planchais* (2021) Urban tree management: diversity of Tilia genus in streets and parks of Paris based on morphological and genetic characteristics, Urban Forestry & Urban Greening	10.1016/j.ufug.2021.127382 🔗 HAL	URBAN FORESTRY & URBAN GREENING	APCE – IPE ; BioDIS – DCFE ; EERI – DCFE ; EMS – DCFE ; ESEAE – EcoEvo
Beillouin, D; Ben-Ari, T*; Malezieux, E; Seufert, V; Makowski, D (2021) Positive but variable effects of crop diversification on biodiversity and ecosystem services. Global Change Biology, 27(19) 4697-4710	10.1111/gcb.15747 🔗 HAL	Global Change Biology	EMS – DCFE
Hulot F.D., Msiteli-Shumba S., Iung M., Noûs C., Thébault E.* (2021) Spatiotemporal beta diversity of plankton species and their interactions in permanent and temporal waterholes in a semiarid savannah. Inland Waters, 11: 508-521,	10.1080/20442041.2021.1935612 🔗 HAL 🔗 pdf	Inland Waters	EERI – DCFE
Zhang, N., Nunan, N.*, Hirsch, P.R., Sun B., Zhou J., Liang Y. (2021) Theory of microbial coexistence in promoting soil–plant ecosystem health. Biology & Fertility of Soils, (sous presse)	10.1007/s00374-021-01586-w 🔗 HAL 🔗 pdf	Biology and Fertility of Soils	BioDIS – DCFE
Goulnik J,, Plantureux S..; Dajoz I.*. & Michelot-Antalik, A (2021) Using Matching Traits to Study the Impacts of Land-Use Intensification on Plant–Pollinator Interactions in European Grasslands: A Review. Insects 2021,12(8), 680;	10.3390/insects12080680 🔗 HAL	Insects	EERI – DCFE
Kouamé Y.A.G.~, Millan M., N’Dri A.B., Bakayoko A., Gignoux J., Charles-Dominique T. (2021) A Quantitative Index Based on Leaf Heteroblasty for Predicting Root Biomass in a Frequently Burned Savanna Species: Cussonia arborea Hochst. Ex A. Rich.(Araliaceae). International Journal of Plant & Soil Science, 33: 220-237	10.9734/IJPSS/2021/v33i1930621 🔗 HAL 🔗 pdf	International Journal of Plant & Soil Science	EMS – DCFE
Mitroi V.^, Maleval V., Deroubaix J.F., Vinçon-Leite B., Humbert J.F.* (2021) What urban lakes and ponds quality is about? Conciliating water quality and ecological indicators with users’ perceptions and expectations about urban lakes and ponds quality in urban areas. Journal of Environmental Policy & Planning	10.1080/1523908X.2022.2037413 🔗 HAL 🔗 pdf	Journal of Environmental Policy & Planning	CoMiC – DCFE
Radujković, D., Verbruggen, E., Seabloom, E., Bahn, M., Biederman, L., Borer, E., Boughton, E., Catford, J., Campioli, M., Donohue, I., Ebeling, A., Eskelinen, A., Fay, P., Hansart, A., Knops, J., MacDougall, A., Ohlert, T., Olde Venterink, H., Raynaud, X.*, Risch, A., Roscher, C., Schuetz, M., Silveira, M.L., Stevens, C., Van Sundert, K., Virtanen, R., Wardle, G., Wragg, P., Vicca, S., (2021). Soil properties as key predictors of global grassland production: have we overlooked micronutrients? Ecology Letters 1–13.	10.1111/ele.13894 🔗 HAL	Ecology Letters	EMS – DCFE
Queiroz, M.E.F. de, Monteiro, J.S., Viana-Junior, A.B., Praxedes, C. de L.B., Lavelle, P.*, Vasconcelos, S.S., 2021. Litter thickness and soil pH influence the diversity of saprotrophic fungi in primary forest fragments in the Amazon. Pedobiologia 89, 150771	10.1016/j.pedobi.2021.150771 🔗 HAL 🔗 pdf	Pedobiologia	BioDIS – DCFE
Bedell R, Hassan A, Tinet A-J, Arrieta-Escobar J, Derrien D, Dignac M-F*, Boly V, Ouvrard S, Pearce JM 2021. Open-Source script for design and 3D Printing of porous structures for soil science. Technologies, 9:67.	10.3390/technologies9030067 🔗 HAL 🔗 pdf	Technologies	CoMiC – DCFE
Barthod J~, Dignac M-F,* Rumpel C* 2021. Effect of decomposition products produced in the presence or absence of epigeic earthworms and minerals on soil carbon stabilization. Soil Biology and Biochemistry 160:108308.	10.1016/j.soilbio.2021.108308 🔗 HAL 🔗 pdf	Soil Biology & Biochemistry	CoMiC – DCFE ; FEST – Sols_ZC
Robert E, Grippa M, Nikiema DE` , Kergoat L, Koudougou H`, Auda Y, Rochelle-Newall, E*. (2021) Environmental determinants of E. coli, link with the diarrheal diseases, and indication of vulnerability criteria in tropical West Africa (Kapore, Burkina Faso). PLoS Negl Trop Dis 15(8): e0009634.	10.1371/journal.pntd.0009634 🔗 HAL 🔗 pdf	PloS Neglected Tropical Diseases	CoMiC – DCFE
Blanquart, F., Abad, C., Ambroise, J., Bernard, M., Cosentino, G., Giannoli, J. M., & Débarre, F.* (2021). Characterisation of vaccine breakthrough infections of SARS-CoV-2 Delta and Alpha variants and within-host viral load dynamics in the community, France, June to July 2021. Eurosurveillance, 26(37), 2100824	10.2807/1560-7917.ES.2021.26.37.2100824 🔗 HAL 🔗 pdf	Eurosurveillance	EERI – DCFE
Mbé, B., Monga, O., Pot, V., Otten, W., Hecht, F., Raynaud, X., Nunan, N., Chenu, C., Baveye, P.C., & Garnier, P. 2021. Scenario modelling of carbon mineralization in3D soil architecture at the microscale: Toward an accessibility coefficient of organic matter for bacteria. European Journal of Soil Science.	10.1111/ejss.13144 🔗 HAL 🔗 pdf	European Journal of Soil Science	BioDIS – DCFE ; EERI – DCFE ; EMS – DCFE
Bettarel Y, Boudin E, Halary S, Auguet J, Péronnin J, Bouvier T, Rochelle-Newall E*, Bui V` and Desnues C (2021) The Hungry Snail, the Fragile Coral, and the Friendly Microbe. Front. Young Minds. 9:573856	10.3389/frym.2021.573856 🔗 HAL 🔗 pdf	Frontiers for Young Minds	CoMiC – DCFE
Harvey E., Marleau J., Gounand I.*,Leroux S., Firkowski C.R., Altermatt F., Blanchet F.G., Cazelles K., Chu C., D’Aloia C., Donelle L., Gravel D., Guichard F., McCann K., Ruppert J., Ward C., Fortin M.-J. (2021) A general meta-ecosystem model to predict ecosystem function at landscape extents. Authorea Preprints	10.22541/au.162799968.80128369/v1 🔗 HAL 🔗 pdf	Authorea	EERI – DCFE
Hugoni M, Nunan N*, Thioulouse J, Dubost A, Abrouk D, Martins JMF, Goffner D, Prigent-Combaret C, Grundmann G (2021) Small-Scale Variability in Bacterial Community Structure in Different Soil Types. Microbial Ecology (sous presse)	10.1007/s00248-020-01660-0 🔗 HAL 🔗 pdf	Microbial Ecology	BioDIS – DCFE
Nakhle, P.; Boithias, L.; Pando-Bahuon, A.; Thammahacksa,C.`; Gallion, N.; Sounyafong, P`.; Silvera, N.; Latsachack, K.`; Soulileuth,B.`; Rochelle-Newall, E.J.; Marcangeli, Y; Pierret, A; Ribolzi, O. Decay Rate of Escherichia coli in a Mountainous Tropical Headwater Wetland. Water 2021, 13, 2068.	10.3390/w13152068 🔗 HAL 🔗 pdf	Water	BioDIS – DCFE ; CoMiC – DCFE ; EMS – DCFE ; F2ZC – Sols_ZC ; FEST – Sols_ZC
Monard C., Jean-Pierre C., Cluzeau D., Le Garrec J.-L., Hellequin E., Hoeffner K., Humbert G.^, Jung V., Le Lann C., Nicolai A., 2021. Short-Term Temporal Dynamics of VOC Emissions by Soil Systems in Different Biotopes. Front. Environ. Sci. 9, 255	10.3389/FENVS.2021.650701 🔗 HAL	Frontiers in Environmental Science	EMS – DCFE
Maurin O., Anest A., Bellot S., Biffin E., Brewer G., Charles-Dominique T.*,Cowan R.S., Dodsworth S., Epitawalage N., Gallego B., Giaretta A. (2021) A nuclear phylogenomic study of the angiosperm order Myrtales, exploring the potential and limitations of the universal Angiosperms353 probe set. American Journal of Botany, 108: 1087-1111	10.1002/ajb2.1699 🔗 HAL 🔗 pdf	American Journal of Botany	EMS – DCFE
TaeOh Kwon, Hideaki Shibata, Sebastian Kepfer-Rojas, Inger K Schmidt, Klaus S Larsen, Claus Beier, Björn Berg, Kris Verheyen, Jean-Francois Lamarque, Frank Hagedorn, Nico Eisenhauer, Ika Djukic, TeaComposition Network, Kwon TaeOh, Shibata Hideaki, Kepfer-Rojas Sebastian, Schmidt Inger Kappel, Larsen Klaus Steenberg, Beier Claus, Berg Björn, Verheyen Kris, Lamarque Jean Francois, Hagedorn Frank, Eisenhauer Nico, Djukic Ika, Caliman Adriano, Paquette Alain, Gutiérrez-Girón Alba, Petraglia Alessandro, Augustaitis Algirdas, Saillard Amélie, Ruiz-Fernández Ana Carolina, Sousa Ana I., Lillebø Ana I., Gripp Anderson da Rocha, Lamprecht Andrea, Bohner Andreas, Francez André-Jean, Malyshev Andrey, Andrić Andrijana, Stanisci Angela, Zolles Anita, Avila Anna, Virkkala Anna-Maria, Probst Anne, Ouin Annie, Khuroo Anzar A., Verstraeten Arne, Stefanski Artur, Gaxiola Aurora, Muys Bart, Gozalo Beatriz, Ahrends Bernd, Yang Bo, Erschbamer Brigitta, Ortíz Carmen Eugenia Rodríguez, Christiansen Casper T., Meredieu Céline, Mony Cendrine, Nock Charles, Wang Chiao-Ping, Baum Christel, Rixen Christian, Delire Christine, Piscart Christophe, Andrews Christopher, Rebmann Corinna, Branquinho Cristina, Jan Dick, Wundram Dirk, Vujanović Dušanka, Adair E. 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Cosentino, G., Bernard, M., Ambroise, J., Giannoli, J. M., Guedj, J., Débarre, F.*, & Blanquart, F. (2022). SARS-CoV-2 viral dynamics in infections with Alpha and Beta variants of concern in the French community. Journal of Infection, 84(1), 94-118	10.1016/j.jinf.2021.07.031 🔗 HAL 🔗 pdf	Journal of Infection	EERI – DCFE
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Edeline, E & Loeuille, N* (2021) Size-dependent eco-evolutionary feedback loops in exploited ecosystems. Recommended by PCI Ecology, accepted in Oikos	10.1111/oik.08592 🔗 HAL 🔗 pdf	Oikos	EERI – DCFE
Arditi R.^ (2021) L’Institut national agronomique et l’application des lois raciales de Vichy, Guerres mondiales et conflits contemporains, 282: 131–151	10.3917/gmcc.282.0131	Guerres mondiales et conflits contemporains	EERI – DCFE
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Audry, S., H. Ateba Bessa, J.-P. Bedimo Bedimo, J.-L. Boeglin, L. Boithias, J.-J. Braun, B. Dupre, M. Faucheux, C. Lagane, J.-C. Marechal, J. R. Ndam-Ngoupayou`, B. Nka Nnomo`, J. Nlozoa`, J.-C. Ntonga`, O. Ribolzi, J. Riotte, E. Rochelle-Newall* and L. Ruiz (2021). “The Multiscale TROPIcal CatchmentS critical zone observatory M-TROPICS dataset I: The Nyong River Basin, Cameroon.” Hydrological Processes: e14138.	10.1002/hyp.14138 🔗 HAL	Hydrological Processes	CoMiC – DCFE
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Kleber, M., Bourg, I.C., Coward, E.K., Hansel, C.M., Myneni, S.C.B., Nunan, N*., 2021. Dynamic interactions at the mineral–organic matter interface. Nature Reviews Earth & Environment.	10.1038/s43017-021-00162-y 🔗 HAL 🔗 pdf	Nature Reviews Earth & Environment	BioDIS – DCFE
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Fitzpatrick, C. L., Alter, S. E., Boughman, J. W., Débarre, F., Edmands, S., Moehring, A., … & Sweigart, A. L. (2021). The virus evolves: four public health priorities for reducing the evolutionary potential of SARS-CoV-2. BioScience, 71(4), 319-319	10.1093/biosci/biab037	BioScience	EERI – DCFE
Patrick Lavelle*, Ervin Duran, Laurent Rousseau, Catalina Sanabria, Joel Vasquez. Soil Macroinvertebrate Communities as Indicators of Ecosystem Services in American Tropical Environments. Biodiversity Online J. 1(4). BOJ.000516.2021.		Biodiversity Online Journal	BioDIS – DCFE
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Noémie Pascault, Olivier Rué, Valentin Loux, Jacques Pédron, Véronique Martin, Jennifer Tambosco, Cécile Bernard, Jean‐François Humbert, Julie Leloup* (2021) Insights into the cyanosphere: capturing the respective metabolisms of cyanobacteria and chemotrophic bacteria in natural conditions? Env. Mic. Reports.	10.1111/1758-2229.12944 🔗 HAL	Environmental Microbiology Reports	CoMiC – DCFE ; EMS – DCFE
Jacob J., Bossard N., Bariac T., Terwilliger V., Biron P., Richard P.*, Le Milbeau C., Vergès E. (2021): Hydrogen isotopic fractionations during syntheses of lipid biomarkers in the seeds of broomcorn millet under controlled environmental conditions. Organic Geochemistry. 154, 104221.	10.1016/j.orggeochem.2021.104221 🔗 HAL	Organic Geochemistry	EMS – DCFE
Fourcade Y.*, WallisDeVries M.F., Kuussaari M., Van Swaay C.A.M., Heliölä J., Öckinger E. (2021) Habitat amount and distribution modify community dynamics under climate change. Ecology Letters, 24, 950-957	10.1111/ele.13691 🔗 HAL 🔗 pdf	Ecology Letters	BioDIS – DCFE
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Picot A~, Monnin T, Loeuille N (2021) Implications of (co)evolution of agriculture and resource foraging for the maintenance of species diversity and community structure. bioRxiv	10.1101/2021.03.02.433551 🔗 HAL	BioRxiv	EERI – DCFE ; ESEAE – EcoEvo
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Van Sundert, K., Arfin Khan, M.A.S., Bharath, S., Buckley, Y.M., Caldeira, M.C., Donohue, I., Dubbert, M., Ebeling, A., Eisenhauer, N., Eskelinen, A., Finn, A., Gebauer, T., Haide, S., Hansart, A., Jentsch, A., Kübert, A., Nijs, I., Nock, C.A., Nogueira, C., Porath-Krause, A.J., Radujković, D., Raynaud, X.*, Risch, A.C., Roscher, C., Scherer-Lorenzen, M., Schuchardt, M.A., Schütz, M., Siebert, J., Sitters, J., Spohn, M., Virtanen, R., Werner, C., Wilfahrt, P., & Vicca, S. 2021. Fertilized graminoids intensify negative drought effects on grassland productivity. Global Change Biology.	10.1111/gcb.15583 🔗 HAL	Global Change Biology	EMS – DCFE
Doré M.°, Fontaine C., Thébault E.* (2021) Relative effects of anthropogenic pressures, climate, and sampling design on the structure of pollination networks at the global scale. Global Change Biology, 27:1266-1280	10.1111/gcb.15474 🔗 HAL 🔗 pdf	Global Change Biology	EERI – DCFE
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Laurie Boithias, Yves Auda, Stéphane Audry, Jean-Pierre Bricquet, Alounsavath Chanhphengxay`, Vincent Chaplot, Anneke de Rouw, Thierry Henry des Tureaux, Sylvain Huon, Jean-Louis Janeau, Keooudone Latsachack`, Yann Le Troquer, Guillaume Lestrelin, Jean-Luc Maeght, Pierre Marchand, Pierre Moreau, Andrew Noble, Anne Pando-Bahuon, Kongkeo Phachomphon`, Khambai Phanthavong`, Alain Pierret, Olivier Ribolzi, Jean Riotte, Henri Robain, Emma Rochelle-Newall, Saysongkham Sayavong`, Oloth Sengtaheuanghoung`, Norbert Silvera, Nivong Sipaseuth`, Bounsamay Soulileuth`, Xaysatith Souliyavongsa`, Phapvilay Sounyaphong`, Sengkeo Tasaketh`, Chanthamousone Thammahacksa`, Jean-Pierre Thiebaux, Christian Valentin*, Olga Vigiak, Marion Viguier^, Khampaseuth Xayyathip`.(2021) The Multiscale TROPIcal CatchmentS critical zone observatory M-TROPICS dataset II: Land use, hydrology and sediment production monitoring in Houay Pano, northern Lao PDR. Hydrological Processes. 2021;35:e14126.	10.1002/hyp.14126 🔗 HAL	Hydrological Processes	BioDIS – DCFE ; CoMiC – DCFE ; F2ZC – Sols_ZC ; FEST – Sols_ZC
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Sisouvanh P’, Trelo-Ges V’., Isarangkool Na Ayutthaya S’., Pierret A., Nunan N., Silvera N., Xayyathip K’., Hartmann C. (2021) Can organic amendments improve soil physical characteristics and increase maize performances in contrasting soil water regimes? Agriculture, 11, 132.	10.3390/agriculture11020132 🔗 HAL 🔗 pdf	Agriculture	CoMiC – DCFE ; BioDIS – DCFE ; F2ZC – Sols_ZC
José Camilo Bedano, Patrick Lavelle*, Xiaoming Zou, Soil biodiversity for the sustainability of agroecosystems, Acta Oecologica, Volume 110, 2021, 103705	10.1016/j.actao.2021.103705	ACTA OECOLOGICA-INTERNATIONAL JOURNAL OF ECOLOGY	BioDIS – DCFE
Rodriguez, L., Suárez, J.C., Pulleman, M., Guaca, L., Rico, A., Romero, M., Quintero, M., Lavelle, P.*, 2021. Agroforestry systems in the Colombian Amazon improve the provision of soil ecosystem services. Applied Soil Ecology 164, 103933	10.1016/j.apsoil.2021.103933	Applied Soil Ecology	BioDIS – DCFE
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Lorette G., Viennet D., Labat D., Massei N., Fournier M., Sebilo M.* & Crancon P. (2021).Water origins assessment and contribution in a mixed autogenic and allogenic karst aquifer on the edge of a sedimentary basin (Causse du Quercy, France). Journal of Hydrology. 593	10.1016/j.jhydrol.2020.125859 🔗 HAL	Journal of hydrology	EMS – DCFE
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Anh, H. Q., T. P. Q. Le`, N. Da Le, X. X. Lu, T. T. Duong`< /span>, J.Garnier, E. Rochelle-Newall*, S. Zhang, N.-H. Oh, C. Oeurng`, C. Ekkawatpanit, T. D. Nguyen, Q. T. Nguyen, T. D. Nguyen, T. N. Nguyen, T. L. Tran, T. Kunisue, R. Tanoue, S. Takahashi, T. B. Minh, H. T. Le, T. N. M. Pham and T. A. H. Nguyen (2020). “Antibiotics in surface water of East and Southeast Asian countries: A focused review on contamination status, pollution sources, potential risks, and future perspectives.” Science of The Total Environment: 142865	10.1016/j.scitotenv.2020.142865	Science of the Total Environment	CoMiC – DCFE
Duchenne F.~, Thébault E.*, Michez D., Gérard M., Devaux C., Rasmont P., Vereecken N.J., Fontaine C. (2020) Long-term effects of global change on occupancy and flight period of wild bees in Belgium. Global Change Biology, 26: 6753– 6766	10.1111/gcb.15379 🔗 HAL 🔗 pdf	Global Change Biology	EERI – DCFE
Alhajeri B., Fourcade Y.*, Upham N. S., Alhaddad H. (2020) A global test of Allen’s rule in Rodents. Global Ecology & Biogeography, 29: 2248-2260	10.1111/geb.13198	Global Ecology and Biogeography	BioDIS – DCFE
Portier P., Pédron J., Taghouti G., Dutrieux C., Barny MA. (2020) Updated taxonomy of Pectobacterium genus in the CIRM-CFBP bacterial collection: when newly described species reveal “old” endemic population. Microorganism 8 :1441	10.3390/microorganisms8091441 🔗 HAL	Microorganisms	CoMiC – DCFE
Maliet, O., Loeuille, N*., Morlon, H (2020) An individual based model for the eco-evolutionary emergence of bipartite interaction networks. Ecology Letters,	10.1111/ele.13592 🔗 HAL 🔗 pdf	Ecology Letters	EERI – DCFE
Mitroi V.^, Ahi K.C.~, Bulot P.Y., Tra F., Deroubaix J.F., Ahoutou M.K., Quiblier C., Kone M., Kalpy J.C., Humbert J.F.* (2020) Can participatory approaches strengthen the monitoring of cyanobacterial blooms in developing countries? Results from a pilot study conducted in the Lagoon Aghien (IvoryCoast). Plos One 15, e0238832	10.1371/journal.pone.0238832 🔗 HAL 🔗 pdf	Plos One	CoMiC – DCFE
Rode, N. O., Courtier-Orgogozo, V., & Débarre, F.* (2020). Can a population targeted by a CRISPR-based homing gene drive be rescued?. G3: Genes, Genomes, Genetics, 10(9), 3403-3415	10.1534/g3.120.401484 🔗 HAL 🔗 pdf	G3-Genes Genomes Genetics	EERI – DCFE
Ottaviani, G., Molina-Venegas, R., Charles-Dominique, T., Chelli, S., Campetella, G., Canullo, R., & Klimešová, J. (2020). The neglected belowground dimension of plant dominance. Trends in ecology & evolution, 35 (9), 763-766.	10.1016/j.tree.2020.06.006 🔗 HAL 🔗 pdf	Trends in Ecology & Evolution	EMS – DCFE
Couvreur V., Rothfuss Y., Meunier F., Bariac T.,* Biron P., Durand J.-L., Richard P., Javaux M. (2020): Disentangling temporal and population variability in plant root water uptake from stable isotopic analysis: a labeling study. Hydrology and Earth System Sciences, European Geosciences Union	10.5194/hess-24-3057-2020 🔗 HAL 🔗 pdf	Hydrology and Earth System Sciences	EMS – DCFE
Van-Heurc M.’, Alegre J.’, Solis, R.’, Del Castillo D.’, Perez L.’, Lavelle, P.*, Quintero, M.’ (2020) Measuring sustainability of smallholder livestock farming in Yurimaguas, Peruvian Amazon. Food and Energy Security, 9, e242,	10.1002/fes3.242	Food and Energy Security	BioDIS – DCFE
Foti L~, Barot S, Gignoux J, Grimaldi M, Lata J-C, Lerch TZ, Nold F, Nunan N, Raynaud X, Abbadie L, Dubs F* 2020. Topsoil characteristics of forests and lawns along an urban-rural gradient in the Paris region. Soil Use and Management: 1-13	10.1111/sum.12640 🔗 HAL	Soil Use and Management	BioDIS – DCFE ; EMS – DCFE ; FEST – Sols_ZC
Frerejacques M., Rousselle C., Gauthier L., Cottet-Emard S., Derobert L., Roynette A., Lerch T.Z.*, Changey F. (2020) Human skin bacterial community response to probiotic (Lactobacillus reuteri DSM 17938) introduction. Microorganisms 8, 1223	10.3390/microorganisms8081223 🔗 HAL	Microorganisms	BioDIS – DCFE
Song, L.’, Boithias, L., Sengtaheuanghoung, O.’, Oeurng C.’, Valentin C., Souksavath B’., Sounyafong P.’, De Rouw A., Soulileuth B.’, Silvera N., Lattanavongkhot B.’, Pierret A., Ribolzi O. (2020) Understorey vegetation limits surface runoff and soil loss in teak plantation-based systems of Northern Lao PDR. Water	10.3390/w12092327	Water	CoMiC – DCFE ; F2ZC – Sols_ZC
El Hayany B., El Fels L., Quenea K., Dignac M.-F., Rumpel C., Gupta V.K., Hafidi M. 2020. Microplastics from lagooning sludge to composts as revealed by Fluorescent staining- Image analysis, Raman spectroscopy and Pyrolysis-GC/MS. Journal of Environmental Management 275 111249.	10.1016/j.jenvman.2020.111249 🔗 HAL	Journal of Environmental Management	CoMiC – DCFE ; FEST – Sols_ZC
Dominguez-Haydar Y.’, Velasquez E.’, Zangerle A., Lavelle P.*, Gutierrez-Eisman S., Jimenez J.J’ (2020) Unveiling the age and origin of biogenic aggregates produced by earthworm species with their NIRS fingerprint in a subalpine meadow of Central Pyrenees. Plos One, 15	10.1371/journal.pone.0237115	Plos One	BioDIS – DCFE
Widhalm T., Fourcade Y.*, Frank T., Öckinger, E. (2020) Population dynamics of the butterfly Pyrgus armoricanus after translocation beyond its northern range margin. Insect Conservation and Diversity, 13: 617-629	10.1111/icad.12430 🔗 HAL 🔗 pdf	Insect Conservation and Diversity	BioDIS – DCFE
Flacher F~, Raynaud X, Hansart A, Geslin B, Motard E, Verstraet S°, Bataille M°, Dajoz I*. 2020. Below-ground competition alters attractiveness of an insect-pollinated plant to pollinators. AoB PLANTS 12: plaa022.	10.1093/aobpla/plaa022 🔗 HAL 🔗 pdf	AoB Plants	EERI – DCFE ; EMS – DCFE
Pédron J., Guyon L., Lecomte A.°, Blottière L.^, Chandeysson C., Rochelle-Newall E., Raynaud X., Berge O., Barny MA. (2020) Comparison of Environmental and Culture-Derived Bacterial Communities through 16S Metabarcoding: A Powerful Tool to Assess Media Selectivity and Detect Rare Taxa. Microorganisms 27:E1129	10.3390/microorganisms8081129 🔗 HAL 🔗 pdf	Microorganisms	CoMiC – DCFE ; EMS – DCFE
Borsali A.H., Lerch T.Z., Besbes R., Gros R., Laffont-Schwob I., Boudenne J.L., Ziarelli F., Pando A., Farnet Da Silva A.M. (2021) Coastal environments shape chemical and microbial properties of forest litters in circum Mediterranean region assessment. European Journal of Soil 72: 1010-1025	10.1111/ejss.13023 🔗 HAL 🔗 pdf	European Journal of Soil Science	BioDIS – DCFE
Changey F^., Blaud A., Pando A., Herrmann A., Lerch T.Z.. (2020). Monitoring soil microbial communities using molecular tools: DNA extraction methods may offset long-term management effects. European Journal of Soil Science 72: 1026-1041	10.1111/ejss.13026 🔗 HAL	European Journal of Soil Science	BioDIS – DCFE
El Hayany B., El Fels L., Dignac M.-F., Quenea K., Rumpel C., Hafidi M. (2020) Pyrolysis-GCMS as a tool for maturity evaluation of compost from sewage sludge and green waste. Waste and biomass Valorization.	10.1007/s12649-020-01184-1 🔗 HAL	Waste and Biomass Valorization	CoMiC – DCFE ; FEST – Sols_ZC
Panettieri M., Courtier-Murias D., Rumpel C.,* Dignac M.-F.*, Almendros G., Chabbi A. 2020. Land-use perturbations in ley grassland decouple the degradation of ancient soil organic matter from the storage of newly derived carbon inputs. SOIL Discussions, 1-31.	10.5194/soil-2020-16 🔗 HAL	SOIL Discussions	CoMiC – DCFE ; FEST – Sols_ZC
Jacopin, E., Lehtinen, S., Débarre, F.*, & Blanquart, F. (2020). Factors favouring the evolution of multidrug resistance in bacteria. Journal of the Royal Society Interface, 17(168), 20200105	10.1098/rsif.2020.0105 🔗 HAL 🔗 pdf	Journal of the Royal Society Interface	EERI – DCFE
Davies, T. J., Daru, B. H., Bezeng, B. S., Charles-Dominique, T., Hempson, G. P., Kabongo, R. M., Maurin, O., Muasya, A.M., van der Bank, M., Bond, W. J. (2020). Savanna tree evolutionary ages inform the reconstruction of the paleoenvironment of our hominin ancestors. Scientific reports, 10(1), 1-8.	10.1038/s41598-020-69378-0 🔗 HAL 🔗 pdf	Scientific Reports	EMS – DCFE
Lehmann, J., Hansel, C.M., Kaiser, C., Kleber, M., Maher, K., Manzoni, S., Nunan, N., Reichstein, M., Schimel, J.P., Torn, M.S., Wieder, W.R., Kögel-Knabner, I., 2020. Persistence of soil organic carbon caused by functional complexity. Nat. Geosci. 13, 529–534.	10.1038/s41561-020-0612-3 🔗 HAL 🔗 pdf	Nature Geoscience	BioDIS – DCFE
Fourcade Y.*, Richardson D.S., Secondi J. (2020) No evidence for a loss of genetic diversity despite a strong decline in size of a European population of the corncrake Crex crex. Bird Conservation International, 30: 260-266	10.1017/s0959270919000327 🔗 HAL 🔗 pdf	Bird Conservation International	BioDIS – DCFE
Zaninotto V~, Raynaud X, Gendreau E, Kraepiel Y, Motard E, Babiar O, Hansart A, Hignard C, Dajoz I*. 2020. Broader phenology of pollinator activity and higher plant reproductive success in an urban habitat compared to a rural one. Ecology and Evolution: 10: 11607– 11621	10.1002/ece3.6794 🔗 HAL 🔗 pdf	Ecology and Evolution	EERI – DCFE ; EMS – DCFE
Arrieta-Escobar J., Derrien D., Ouvrard S., Asadollahi-Yazdi E., Hassan A., Boly V., Tinet A.-J., Dignac M.-F.* 2020. 3D Printing: an emerging opportunity for soil science. Geoderma. 378 114588.	10.1016/j.geoderma.2020.114588 🔗 HAL	Geoderma	CoMiC – DCFE
Le Mer G.~, Barthod J.~, Dignac M.-F.,* Barré P., Baudin F., Rumpel C.* 2020. Inferring earthworms’ impact on the stability of organo-mineral associations by Rock-Eval pyrolysis and 13C NMR spectroscopy. Organic Geochemistry, 104016.	10.1016/j.orggeochem.2020.104016 🔗 HAL	Organic Geochemistry	CoMiC – DCFE ; FEST – Sols_ZC
Célini L., Roy V., Delabie J., Frechault S., Mora P. (2020). Présence de Solenopsis globularia (F. Smith, 1858) et Cardiocondyla emeryi Forel, 1881 (Formicidae : Myrmicinae) dans l’île de Saint Barthélemy aux Antilles Françaises. Bulletin de la Société Entomologique de France, 125 (2) : 145 162.	10.32475/bsef_2061	Bulletin de la Société Entomologique de France	BioDIS – DCFE ; ESEAE – EcoEvo
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Olokotum M., Mitroi V.^, Troussellier M., Semyalo R., Bernard C., Montuelle B., Okello W., Quiblier C., Humbert J.F. (2020) A review of the socioecological causes and consequences of cyanobacterial blooms in Lake Victoria. Harmful Algae 96, 101829	10.1016/j.hal.2020.101829 🔗 HAL 🔗 pdf	Harmful Algae	CoMiC – DCFE
Olivier T., Thébault E.*, Elias M., Fontaine B., Fontaine C. (2020) Urbanization and agricultural intensification destabilize animal communities differently than diversity loss. Nature Communications, 11: 2686.	10.1038/s41467-020-16240-6 🔗 HAL 🔗 pdf	Nature Communications	EERI – DCFE
Duran-Bautista E.H.’, Armbrecht I.’, Acioli A.N.S.’, Suarez J.C.’, Romero M.’, Quintero M.’, Lavelle, P.* (2020) Termites as indicators of soil ecosystem services in transformed amazon landscapes. Ecological Indicators, 117:106550	10.1016/j.ecolind.2020.106550	Ecological Indicators	BioDIS – DCFE
Nunan N, Schmidt H, Raynaud X. 2020. The ecology of heterogeneity: soil bacterial communities and C dynamics. Philosophical Transactions of the Royal Society B: Biological Sciences 375: 20190249.	10.1098/rstb.2019.0249 🔗 HAL 🔗 pdf	PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES	BioDIS – DCFE ; EMS – DCFE
Pruvost C.~ , Mathieu J., Nunan N., Gigon A., Pando A., Lerch T.Z.*, Blouin M. 2020.Tree growth and macrofauna colonization in Technosols constructed from recycled urban wastes. Ecological Engineering, 153, 105886	10.1016/j.ecoleng.2020.105886 🔗 HAL 🔗 pdf	Ecological Engineering	BioDIS – DCFE ; EERI – DCFE
Vidal A., Lenhart T., Dignac M.F, Biron P., Höschen C., Barthod J., Vedere C., Vaury V., Bariac T., Rumpel C.* (2020): Promoting plant growth and carbon transfer to soil with with organic amendments produced with mineral additives. Geoderma 374:114454	10.1016/j.geoderma.2020.114454 🔗 HAL	Geoderma	EMS – DCFE ; CoMiC – DCFE ; FEST – Sols_ZC ; F2ZC – Sols_ZC
Carraro L., Bertuzzo E., Fronhofer E. A., Gounand I.*, Rinaldo A., and Altermatt A. (2020) Generation and application of river network analogues for use in ecology and evolution. Ecology and Evolution 10(14): 7537-7550	10.1002/ece3.6479 🔗 HAL 🔗 pdf	Ecology and Evolution	EERI – DCFE
Dusza Y~, Kraepiel Y, Abbadie L, Barot S, Carmignac D, Dajoz I, Gendreau E, Lata J-C, Meriguet J, Motard E, Raynaud X* 2020. Plant-pollinator interactions on green roofs are mediated by substrate characteristics and plant community composition. Acta Oecologica 105: 103559.	10.1016/j.actao.2020.103559 🔗 HAL	ACTA OECOLOGICA-INTERNATIONAL JOURNAL OF ECOLOGY	EERI – DCFE ; EMS – DCFE
Taheri S.~, Decaëns T., Cunha L., Brown G.G., Da Silva E., Bartz M.L.C., Baretta D., Dupont L.* (2020) Genetic evidence of multiple introductions and mixed reproductive strategy in the peregrine earthworm Pontoscolex corethrurus. Biological Invasions, 22 : 2545-2557	10.1007/s10530-020-02270-0 🔗 HAL 🔗 pdf	Biological Invasions	BioDIS – DCFE
Lavelle P., Spain A., Fonte S., Bedano, J.C.’, Blanchart E., Galindo V.’, Grimaldi, M., Jimenez J.J.’, Velasquez E.’, Zangerle, A. (2020) Soil aggregation, ecosystem engineers and the C cycle. Acta Oecologica 105, 103561	10.1016/j.actao.2020.103561 🔗 HAL 🔗 pdf	ACTA OECOLOGICA-INTERNATIONAL JOURNAL OF ECOLOGY	BioDIS – DCFE ; F2ZC – Sols_ZC
Jacquet J., Gounand I.*, Altermatt F. (2020) How pulse disturbances shape size-abundance pyramids. Ecology Letters. Early view	10.1111/ele.13508 🔗 HAL 🔗 pdf	Ecology Letters	EERI – DCFE
Gounand I.*, Little, C.J., Harvey E., Altermatt F. (2020) Global quantitative synthesis of ecosystem functioning across climatic zones and ecosystem types. Global Ecology and Biogeography, Early view	10.1111/geb.13093 🔗 HAL 🔗 pdf	Global Ecology and Biogeography	EERI – DCFE
Nadolny H.’, Santos A.’, Demetrio W.’, Ferreira T.’, Maia L.D.’, Conrado A.C.’, Bartz M., Garrastazu M.’, da Silva, E., Lavelle, P., Baretta D.’, Pasini A.’, Vezzani F.’, Sousa J.P.’, Cunha, L.’, Mathieu, J., Rombke, J., Brown, G. (2020) Recommendations for assessing earthworm populations in Brazilian ecosystems. Pesquisa Agropecuária Brasileira, 55	10.1590/S1678-3921.pab2020.v55.01006 🔗 HAL 🔗 pdf	Pesquisa Agropecuária Brasileira	BioDIS – DCFE ; EERI – DCFE
Deckmyn, G., O. Flores, M. Mayer, X. Domene, A. Schnepf, K. Kuka, K. Van Looy, D. P. Rasse, M. J. I. Briones, S. Barot*, M. Berg, E. Vanguelova, I. Ostonen, H. Vereecken, L. M. Suz, B. Frey, A. Frossard, A. Tiunov, J. Frouz, T. Grebenc, M. Öpik, M. Javaux, A. Uvarov, O. Vindušková, P. Henning Krogh, O. Franklin, J. Jiménez, and J. Curiel Yuste. 2020. KEYLINK: towards a more integrative soil representation for inclusion in ecosystem scale models. I. review and model concept. PeerJ 8.	10.7717/peerj.9750 🔗 HAL 🔗 pdf	PeerJ	EMS – DCFE
Kondratyeva A., Knapp S., Durka W., Kühn I., Vallet J., Machon N., Martin G., Motard E.*, Grandcolas P., Pavoine S. (2020) Urbanization Effects on Biodiversity Revealed by a Two-Scale Analysis of Species Functional Uniqueness vs. Redundancy. Front. Ecol. Evol., 8 (73): 1-16	10.3389/fevo.2020.00073 🔗 HAL 🔗 pdf	Frontiers in Ecology and Evolution	EERI – DCFE
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Nicolai A., Guernion M., Guillocheau S., Hoeffner K., Le Gouar P., Ménard N., Piscart C., Vallet D., Hervé M.E.T.T., Benezeth E., Chedanne H., Blémus J., Vernon P., Cylly D., Hotte H., Loïs G., Mai B., Perez G., Ouisse T., Monard C., Wiegand C., Caudal J.-P.P., Butet A., Dahirel M., Barbe L., Balbi M., Briand V., Bormans M., Charrier M., Bouger G., Jung V., Le Lann C., Pannard A., Petillon J., Rantier Y., Marguerie D., Tougeron K., Devogel P., Dugravot S., Dubos T., Garrin M., Carnet M., Gouraud C., Chambet A., Esnault J., Poupelin M., Welk E., Bütof A., Dubois G.F., Humbert G.^, Marie-Réau O., Norvez O., Richard G., Froger B., Rochais C., Potthoff M., Ayati K., Bellido A., Rissel A., Santonja M., Farcy J.-O.O., Collias E., Sene L., Cluzeau D., Supper R., 2020. Transdisciplinary bioblitz: Rapid biotic and abiotic inventory allows studying environmental changes over 60 years at the Biological Field Station of Paimpont (Brittany, France) and opens new interdisciplinary research opportunities. Biodivers. Data J. 8, e50451	10.3897/BDJ.8.E50451 🔗 HAL 🔗 pdf	Biodiversity Data Journal	EMS – DCFE
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Chakrawal, A., Herrmann, A.M., Koestel, J., Jarsjö, J., Nunan, N., Kätterer, T., Manzoni, S., 2020. Dynamic upscaling of decomposition kinetics for carbon cycling models. Geoscientific Model Development 13, 1399–1429.	10.5194/gmd-13-1399-2020 🔗 HAL 🔗 pdf	Geoscientific Model Development	BioDIS – DCFE
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Rankovic A., Geslinc B., Perrarda A., Barbillon A., Vaury V., Abbadie L., Dajoz I.(2020). Urbanization effects on wild bee carbon and nitrogen stable isotope ratios in the Paris region. Acta Oecologica, Volume 105.	10.1016/j.actao.2020.103545 🔗 HAL 🔗 pdf	ACTA OECOLOGICA-INTERNATIONAL JOURNAL OF ECOLOGY	EERI – DCFE ; F2ZC – Sols_ZC
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Brunel C., Gros R., Lerch T.Z.*, Farnet Da Silva A.M. (2020) Changes in soil organic matter and microbial communities after fine and coarse residues inputs from Mediterranean tree species. Applied Soil Ecology 149: 103516	10.1016/j.apsoil.2020.103516 🔗 HAL 🔗 pdf	Applied Soil Ecology	BioDIS – DCFE
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Houé Ngouna R., Ratolojanahary R., Medjaher K., Dauriac F., Sebilo M.* & Junca-Bourié J. (2020). A data-driven method for detecting and diagnosing causes of water quality contamination in a dataset with a high rate of missing values. Groundwater quality assessment combining supervised and unsupervised methods. Engineering applications of artificial intelligence. 95	10.1016/j.engappai.2020.103822 🔗 HAL 🔗 pdf	Engineering applications of artificial intelligence	EMS – DCFE
Mthimkhulu, S.; Titshall, L. W.; Lerch, T. Z.; Podwojewski, P.; Van Antwerpen, R. (2019) Effect of sugarcane residue retention and fertiliser application on soil microbial abundance and community structure. INTERNATIONAL SUGAR JOURNAL, 122, 1453	0	INTERNATIONAL SUGAR JOURNAL	BioDIS – DCFE ; FEST – Sols_ZC
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HARALDSSON M., RAOUX A., RIERA F., HAY J., DAMBACHER J.M., NIQUIL N. (2020). How to model social-ecological systems? – A case study on the effects of a future offshore wind farm on the local society and ecosystem, and whether social compensation matters. Marine Policy, 119	https://doi.org/10.1016/j.marpol.2020.104031 🔗 HAL	Marine Policy	DCFE
NIQUIL N., HARALDSSON M., SIME-NGANDO T., HUNEMAN P., BORRETT S.R. (2020). Shifting levels of ecological network’s analysis reveals different system properties. Philosophical Transactions of the Royal Society B: Biological Sciences, 375 (1796)	https://doi.org/10.1098/rstb.2019.0326 🔗 HAL	Philosophical Transactions of the Royal Society B: Biological Sciences	DCFE
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N’Dri, A. B.`, Koné, A. W.`, Loukou, S. K. K.`, Barot, S., & Gignoux, J. (2019). Carbon and nutrient losses through biomass burning, and links with soil fertility and yam (Dioscorea alata) production. Experimental Agriculture, 55(5), 738–751.	10.1017/S0014479718000327 🔗 HAL	Experimental Agriculture	EMS – DCFE
Czuppon, P.^, Constable G.W.A. (2019). Invasion and extinction dynamics of mating types under facultative sexual reproduction, Genetics 213 (2): 567-580	10.1534/genetics.119.302306 🔗 HAL 🔗 pdf	Genetics	EERI – DCFE
Humbert J.F.*, Quiblier C. (2019) The Suitability of Chemical Products and Other Short-Term Remedial Methods for the Control of Cyanobacterial Blooms in Freshwater Ecosystems. Frontiers in Environmental Science 7, 176	10.3389/fenvs.2019.00176 🔗 HAL 🔗 pdf	Frontiers in Environmental Science	CoMiC – DCFE
Portier P, Pédron J, Taghouti G`, Fischer-Le Saux M, Caullireau E, Bertrand C^, Laurent A, Chawki K, Oulgazi S`, Moumni M`, Andrivon D, Dutrieux C, Faure D, Hélias V, Barny MA (2019) Elevation of Pectobacterium carotovorum subsp. odoriferum to species level as Pectobacterium odoriferum sp. nov., proposal of Pectobacterium brasiliense sp. nov. and Pectobacterium actinidiae sp. nov., emended description of Pectobacterium carotovorum and description of Pectobacterium versatile sp. nov.,isolated from streams and symptoms on diverse plants. Int J Syst Evol Microbiol. 69(10):3214-23	10.1099/ijsem.0.003611 🔗 HAL	International Journal of Systematic and Evolutionary Microbiology	CoMiC – DCFE
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Pédron J, Van Gijsegem F (2019) Diversity in the Bacterial Genus Dickeya Grouping Plant Pathogens and Waterways Isolates. OBM Genetics 2019, Volume 3, Issue 4.	10.21926/obm.genet.1904098	OBM Genetics	CoMiC – DCFE
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Yang S., Zheng Q., Yuan M., Shi Z., Chiariello N. R., Docherty K. M., Dong S., Field C. B., Gu Y., Gutknecht J. L. M., Hungate B. A., Le Roux X., Ma X., Niboyet A.*, Yuan T., Zhou J., Yang Y.(2019). Long-term elevated CO2 shifts composition of soil microbial communities in a Californian annual grassland, reducing growth and N utilization potentials. Science of the Total Environment, 652:1474-1481	10.1016/j.scitotenv.2018.10.353 🔗 HAL	science of the total environment	EMS – DCFE
Lepère C., Domaizon I., Humbert J.F.*, Jardillier L., Hugoni M., Debroas D. (2019) Diversity, spatial distribution and activity of fungi in freshwater ecosystems. PeerJ	10.7717/peerj.6247 🔗 HAL 🔗 pdf	PeerJ	CoMiC – DCFE
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Pédron J, Bertrand C^, Taghouti G, Portier P, Barny MA. (2019) Pectobacterium aquaticum sp. nov., isolated from waterways. Int J Syst Evol Microbiol. 69(3): 745-751	10.1099/ijsem.0.003229 🔗 HAL 🔗 pdf	International Journal of Systematic and Evolutionary Microbiology	CoMiC – DCFE
Zeitoun V., Bourdon E., Latsachack K.O.’, Pierret A*, Singthong S’, Baills H., Forestier H. (2019) Discovery of a new open-air Hoabinhian site in Luang Prabang province (Lao PDR). Dating and technological study of the lithic assemblage. Comptes Rendus Palevol, 18, 142-157.	10.1016/j.crpv.2018.05.003 🔗 HAL 🔗 pdf	Comptes rendus Palevol	CoMiC – DCFE
Loeuille, N.* 2019 Eco-evolutionary dynamics in a disturbed world: implications for the maintenance of ecological networks. F1000Research, 2019, 8(F1000 Faculty Rev):97	10.12688/f1000research.15629.1	F1000Research	EERI – DCFE
Quénéa K.,Andrianjara I.~°,Rankovic A.~, Gan E., Aubry E., Lata J.C., Barot S., Castrec-Rouelle M. (2019) Influence of the residence time of street trees and their soils on trace element contamination in Paris (France). Environmental Science and Pollution Research, 26 (10): 9785-9795	10.1007/s11356-019-04405-w 🔗 HAL	Environmental Science and Pollution Research	APCE – IPE ; EERI – DCFE ; EMS – DCFE
Koffi K.F.~`, N’Dri A.B.`, Lata J.C., Konaté S.`,Srikanthasamy T.~,Konan M.`, Barot S. (2019) Effect of fire regime on the grass community of the humid savanna of Lamto, Ivory Coast. Journal of Tropical Ecology 35 (1): 1-7	10.1017/s0266467418000391 🔗 HAL	Journal of Tropical Ecology	EMS – DCFE
Hmimina G., Hulot F.D., Humbert J.F.*, Quiblier C., Tambosco K., Lemaire B.J., Vinçon-Leite B., Audebert L., Soudani K. (2019) Linking phytoplankton pigment composition and optical properties: A framework for developing remote-sensing metrics for monitoring cyanobacteria. Water Research 148, 504-514	10.1016/j.watres.2018.09.055 🔗 HAL 🔗 pdf	Water Research	CoMiC – DCFE
James S.W., Bartz M.L.C., Stanton D.W.G., Conrado A.C.,Dupont L.*,Taheri S.~, Da Silva E., Cunha L., Brown G.G. (2019) A neotype for Pontoscolex corethrurus (Müller, 1857) (Clitellata). Zootaxa, 4545 (1) : 124-132	10.11646/zootaxa.4545.1.7 🔗 HAL	Zootaxa	BioDIS – DCFE
Alič Š, Pédron J, Dreo T, Van Gijsegem F (2019) Genomic characterisation of the new Dickeya fangzhongdai species regrouping plant pathogens and environmental isolates. BMC Genomics. 20(1): 34	10.1186/s12864-018-5332-3 🔗 HAL 🔗 pdf	BMC Genomics	CoMiC – DCFE
Essarts YR des, Pédron J, Blin P, Dijk EV, Faure D, Gijsegem FV (2019) Common and distinctive adaptive traits expressed in Dickeya dianthicola and Dickeya solani pathogens when exploiting potato plant host. Environmental Microbiology.21(3), 1004–1018	10.1111/1462-2920.14519 🔗 HAL	Environmental Microbiology	CoMiC – DCFE
Ratolojanahary R., Houé Ngouna R., Medjaher K., Junca-Bourié J., Dauriac F. & Sebilo M.* (2019). Model selection to improve multiple imputation for handling high rate missingness in a water quality dataset. Expert Systems with Applications. 131, 299-307	10.1016/j.eswa.2019.04.049 🔗 HAL 🔗 pdf	Expert Systems with Applications	EMS – DCFE
Estrela, S., Libby, E., Van Cleve, J., Débarre, F.*, Deforet, M., Harcombe, W. R., Peña J., Brown S. P., Hochberg, M. E. (2019). Environmentally mediated social dilemmas. Trends in ecology & evolution, 34(1), 6-18	10.1016/j.tree.2018.10.004 🔗 HAL 🔗 pdf	Trends in Ecology & Evolution	EERI – DCFE
Santos, B.F., Perrard, A.* & Brady, S.G. 2019. Running in circles in phylomorphospace: host environment constrains morphological diversification in parasitic wasps. Proceedings of the Royal Society B, 286(1895), p.20182352	10.1098/rspb.2018.2352 🔗 HAL	PROCEEDINGS OF THE ROYAL SOCIETY B – BIOLOGICAL SCIENCES	EERI – DCFE
PONISIO L., VALDOVINOS F., ALLHOFF K., GAIARSA M., BARNER A., GUIMARAES P., HEMBRY D., MORRISON B., GILLESPIE R. (2019-04-09). A Network Perspective for Community Assembly. Frontiers in Ecology and Evolution, 7, 103	https://doi.org/10.3389/fevo.2019.00103 🔗 HAL	Frontiers in Ecology and Evolution	DCFE
N’Dri, A. B.`, Soro, T. D.`, Gignoux, J., Dosso, K.`, Koné, M.`, N’Dri, J. K.`, Koné, N.A.`, Barot, S. (2018). Season affects fire behavior in annually burned humid savanna of West Africa. Fire Ecology, 14, 5.	10.1186/s42408-018-0005-9 🔗 HAL 🔗 pdf	Fire Ecology	EMS – DCFE
Watteau F., Dignac M.-F.*, Bouchard A., Revallier A., Houot S. 2018. Microplastic detection in soil amended with municipal solid waste composts as revealed by transmission electronic microscopy and Pyrolysis/GC/MS. Frontiers in Sustainable Food Systems, 2: 81	10.3389/fsufs.2018.00081 🔗 HAL 🔗 pdf	Frontiers in Sustainable Food Systems	CoMiC – DCFE
Prosnier, L.~, Médoc, V.* & Loeuille, N.* 2018. Parasitism effects on coexistence and stability within simple trophic modules. Journal of Theoretical Biology, 458: 68-77	10.1016/j.jtbi.2018.09.004 🔗 HAL 🔗 pdf	Journal of Theoretical Biology	EERI – DCFE
Dubs, F.^, A. Vergnes, E. Mirlicourtois”, I. Le Viol, C. Kerbiriou, J. Goulnik, S. Belghali, L. Bentze, S. Barot*, and E. Porcher.2019. Positive effects of wheat variety mixtures on aboveground arthropods are weak and variable.Basic and Applied Ecology33:66-78.	10.1016/j.baae.2018.07.008 🔗 HAL 🔗 pdf	Basic and Applied Ecology	EMS – DCFE
Yoni M.~ , Sako A, Abbadie L.* & Serpantié G. 2018. Carbon and nitrogen dynamics of soil organic matter fractions in thickets and intergrowth areas of Sudanian savannah grasslands, Bondoukuy, Western Burkina Faso. Environment and Natural Resources Research 8 : 16-31	10.5539/enrr.v8n4p16 🔗 pdf	Environment and Natural Resources Research	EMS – DCFE
Schmidt, H., Nunan, N., Höck, A., Eickhorst, T., Kaiser, C., Woebken, D., Raynaud, X., 2018. Recognizing Patterns: Spatial Analysis of Observed Microbial Colonization on Root Surfaces. Frontiers in Environmental Science 6.	10.3389/fenvs.2018.00061 🔗 HAL 🔗 pdf	Frontiers in Environmental Science	BioDIS – DCFE ; EMS – DCFE
Harvey E., Gounand* I., Fronhofer E.A., and Altermatt F. (2018) Disturbance reverses classic biodiversity predictions in river-like landscapes. Proceedings of the Royal Society B 285(1893): 20182441	10.1098/rspb.2018.2441 🔗 HAL	PROCEEDINGS OF THE ROYAL SOCIETY B – BIOLOGICAL SCIENCES	EERI – DCFE
Majdi N., Hette-Tronquart N., Auclair E., Bec A., Chouvelon T., Cognie B., Danger M., Decottignies P., Dessier A., Desvilettes C., Dubois S., Dupuy C., Fritsch C., Gaucherel C., Hedde M., Jabot F., Lefebvre S., Marzloff M.P., Pey B., Peyrard N., Powolny T., Sabbadin R., Thébault E.*, Perga M.-E. (2018) There’s no harm in having too much: A comprehensive toolbox of methods in trophic ecology. Food webs, 17, e00100.	10.1016/j.fooweb.2018.e00100 🔗 HAL 🔗 pdf	Food webs	EERI – DCFE
Fourcade Y.* ,Åström S., Öckinger E. (2019) Climate and land-cover change alter bumblebee species richness and community composition in subalpine areas. Biodiversity and Conservation, 28: 639–653	10.1007/s10531-018-1680-1 🔗 HAL 🔗 pdf	Biodiversity and Conservation	BioDIS – DCFE
Ribolzi, O., Lacombe, G., Pierret, A., Robain, H., Sounyafong, P.`, de Rouw, A., Soulileuth, B.`, Mouche, E., Huon, S., Silvera, N., Latxachak, K.O.`, Sengtaheuanghoung, O.`, Valentin, C. Interacting land use and soil surface dynamics control groundwater outflow in a montane catchment of the lower Mekong basin. Agric. Ecosyst. Environ. 268, 90–102	10.1016/j.agee.2018.09.005 🔗 HAL	Agriculture Ecosystems & Environment	CoMiC – DCFE ; F2ZC – Sols_ZC
Dance D.A.B., Knappik M., Dittrich S., Viengmon D., Silisouk J.’, Vongsouvath M.’, Rattanavong S.,’ Pierret A.*, Newton P.N., Amornchai P’, Vanaporn Wuthiekanun’, Langla S., Limmathurotsakul D’. (2018) Evaluation of consensus method for the culture of Burkholderia pseudomallei in soil samples from Laos. Wellcome Open Research.	10.12688/wellcomeopenres.14851.2 🔗 HAL 🔗 pdf	Wellcome Open Research	CoMiC – DCFE
Gounand I.*, Little C.J., Harvey E., and Altermatt F. (2018) Cross-ecosystem carbon flows connecting ecosystems worldwide. Nature Communications 9(1) : 4825	10.1038/s41467-018-07238-2 🔗 HAL 🔗 pdf	Nature Communications	EERI – DCFE
Le, H.T.~`, E. Rochelle-Newall, Y. Auda, O. Ribolzi, O. Sengtaheuanghoung`, E. Thebault, B. Soulileuth`, and T. Pommier, Vicinal land use change strongly drives stream bacterial community in a tropical montane catchment. FEMS microbiology ecology, 2018. 94(11).	10.1093/femsec/fiy155 🔗 HAL	FEMS Microbiology Ecology	CoMiC – DCFE ; EERI – DCFE
Fourcade Y.*, BesnardA.G., Beslot E., Hennique S., Mourgaud G., Berdin G., Secondi J (2018) Habitat selection in a dynamic seasonal environment: Vegetation composition drives the choice of the breeding habitat for the community of passerines in floodplain grasslands. Biological Conservation, 228: 301-309	10.1016/j.biocon.2018.11.007 🔗 HAL	Biological Conservation	BioDIS – DCFE
Prud’homme C., Moine O., Mathieu J.*, Saulnier-Copard S., Antoine P. (2018) High-resolution quantification of earthworm calcite granules from western European loess sequences reveals stadial-interstadial climatic variability during the Last Glacial,Boreas. 48(1) : 257-268	10.1111/bor.12359 🔗 HAL	Boreas	EERI – DCFE
Fonte S. J., Botero C., Quintero D. C., Lavelle P.*, van Kessel C. (2019). Earthworms regulate plant productivity and the efficacy of soil fertility amendments in acid soils of the Colombian Llanos. Soil Biology and Biochemistry, 129: 136‑143	10.1016/j.soilbio.2018.11.016	Soil Biology & Biochemistry	BioDIS – DCFE
Baveye, P.C., Otten, W., Kravchenko, A., Balseiro-Romero, M., Beckers, É., Chalhoub, M., Darnault, C., Eickhorst, T., Garnier, P., Hapca, S., Kiranyaz, S., Monga, O., Mueller, C.W., Nunan, N.*, Pot, V., Schlüter, S., Schmidt, H., Vogel, H.-J., 2018. Emergent Properties of Microbial Activity in Heterogeneous Soil Microenvironments: Different Research Approaches Are Slowly Converging, Yet Major Challenges Remain. Frontiers in Microbiology 9	10.3389/fmicb.2018.01929 🔗 HAL 🔗 pdf	Frontiers in Microbiology	BioDIS – DCFE
Florence Dubs , X. Le Roux, Vincent Allard, B. Andrieu, S. Barot , A. Cantarel, C. De Vallavielle-Pope, A. Gauffreteau, I. Goldringer, C. Montagnier, T. Pommier, E. Porcher, S. Saint-Jean, J. Borg, S. Bourdet-Massein, D. Carmignac , A. Duclouet, E. Forst, N. Galic, L. Gerard, M. Hugoni, A. Hure, A. Larue, J-C. Lata , C. Lecarpentier, M. Leconte, E. Le Saux, I. Le Viol, P. L’Hote, P. Lusley, M. Mouchet, A. Niboyet *, Rémi Perronne, E. Pichot, S. Pin, S. Salmon, D. Tropée, A. Vergnes, T. Vidal, J. Enjalbert (2018) An experimental design to test the effect of wheat variety mixtures on biodiversity and ecosystem services. hal-01843564	🔗 HAL 🔗 pdf	HAL	EMS – DCFE
Isidora Echenique-Subiabre I.~, Tenon M., Humbert J.F.*, Quiblier C. (2018) Spatial and Temporal Variability in the Development and Potential Toxicity of Phormidium Biofilms in the Tarn River, France. Toxins 10, 418	10.3390/toxins10100418 🔗 HAL 🔗 pdf	Toxins	CoMiC – DCFE
Faye P`, Bertrand C^, Pédron J, Barny MA (2018) Draft genomes of “Pectobacterium peruviense” strains isolated from fresh water in France. Stand Genomic Sci. 13: 27	10.1186/s40793-018-0332-0 🔗 HAL 🔗 pdf	Standards in Genomic Sciences	CoMiC – DCFE
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Echenique-Subiabre I.~, Zancarini A.^, Heath M.W., Wood S.A., Quiblier C., Humbert J.F.* (2018) Multiple processes acting from local to large geographical scales shape bacterial communities associated with Phormidium (cyanobacteria) biofilms in French and New Zealand rivers. Scientific Reports 8, 14416	10.1038/s41598-018-32772-w 🔗 HAL 🔗 pdf	Scientific reports	CoMiC – DCFE
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Nkwain Y.F., Demyan M. S., Rasche F., Dignac M.-F.*, Schulz E., Kätterer T., Müller T., Cadisch G. (2018) Coupling pyrolysis with mid-infrared spectroscopy (Py-MIRS) to fingerprint biochemical quality of soil organic matter. Journal of Analytical and Applied Pyrolysis, 133: 176-184	10.1016/j.jaap.2018.04.004 🔗 HAL	Journal of Analytical and Applied Pyrolysis	CoMiC – DCFE
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Alic S, Van Gijsegem F, Pédron J*, Ravnikar M and Dreo T (2018) Diversity within the novel Dickeya fangzhongdai sp., isolated from infected orchids, water and pears. Plant Pathology 67: 1612-1620.	10.1111/ppa.12866 🔗 HAL	Plant Pathology	CoMiC – DCFE
Rochelle-Newall E., Niboyet A., Jardillier L., Fiorini S., Chollet S., Llavata M., de Santis E., Barot S., Lacroix G. (2018)Impacts of elevated atmospheric CO2 concentration on terrestrial-aquatic carbon transfer and a downstream aquatic microbial community. Aquatic Sciences, 80, Article Number: 27	10.1007/s00027-018-0577-0 🔗 HAL	Aquatic Sciences	CoMiC – DCFE ; EERI – DCFE ; EMS – DCFE
Forey, E., M. Chauvat, S. F. M. Coulibaly, E. Langlois, S. Barot*, and J. Clause. 2018. Inoculation of an ecosystem engineer (Earthworm: Lumbricus terrestris) during experimental grassland restoration: Consequences for above and belowground soil compartments. Applied Soil Ecology125:148-155.	10.1016/j.apsoil.2017.12.021 🔗 HAL	Applied Soil Ecology	EMS – DCFE
Poblete-Grant P.°, Biron P., Bariac T., Cartes P.`, Mora M.L.L.`, Rumpel C*. (2019): Synergistic and antagonistic effects of poultry manure and phosphate rock on soil P availability, ryegrass production, and P uptake. Agronomy , 2019, 9, 191.	10.3390/agronomy9040191 🔗 HAL 🔗 pdf	Agronomy	EMS – DCFE ; FEST – Sols_ZC
Débarre, F.*, Rode, N. O., & Ugelvig, L. V. (2018). Gender equity at scientific events. Evolution Letters, 2(3), 148-158.	10.1002/evl3.49 🔗 HAL 🔗 pdf	Evolution Letters	EERI – DCFE
Nguyen, T. M. H.~, G. Billen, J. Garnier, T. P. Q. Le, Q. L. Pham, S. Huon* & E. Rochelle Newall*, 2018. Organic carbon transfers in the subtropical Red River system (Viet Nam): insights on CO2 sources and sinks. Biogeochemistry 138(3):277-295.	10.1007/s10533-018-0446-x 🔗 HAL	Biogeochemistry	CoMiC – DCFE ; F2ZC – Sols_ZC
Nguyen, L.T., Nguyen, A.D., Nguyen, T.T., Perrard, A.* & Carpenter, J.M. (2018) Molecular phylogeny of the paper wasp subgenus Polistes (Polistella) Ashmead, 1904 (Hymenoptera: Vespidae: Polistinae) from Vietnam. Journal of Asia-Pacific Entomology 21: 638-644.	10.1016/j.aspen.2018.04.006	Journal of Asia-Pacific Entomology	EERI – DCFE
Barthod J.~, Rumpel C., Dignac M-F. (2018) Composting with additives to improve organic amendments. A review. Agronomy for Sustainable Development, 38:17	10.1007/s13593-018-0491-9 🔗 HAL 🔗 pdf	Agronomy for Sustainable Development	CoMiC – DCFE ; FEST – Sols_ZC
Barot, S*. 2018. Can we predict the long term impact of earthworms on plant successions? Functional Ecology 32:596-598.	10.1111/1365-2435.13020 🔗 HAL	Functional Ecology	EMS – DCFE
Gaba, S., A. Alignier, S. Aviron, S. Barot*, M. Blouin, M. Hedde, F. Jabot, A. Vergnes, A. Bonis, S. Bonthoux, B. Bourgeois, V. Bretagnolle, R. Catarino, and C. Coux. 2018. Ecology for sustainable and multifunctional agriculture. 28: Ecology for agriculture.	10.1007/978-3-319-90309-5 🔗 HAL	Sustainable Agriculture Reviews	EMS – DCFE
Dubuisson, J. Y., Le Pechon, T, Bauret, L.; Rouhan, G.; Reeb, C.; Boucheron-Dubuisson, E.; Selosse, M. A.; Chaussidoni, C.; Dajoz, I; Pynee, K.; Grangaud, E; Robert, Y.; Tamont, J. M. & Hennequin, S. 2018. Disentangling the diversity and taxonomy of Hymenophyllaceae (Hymenophyllales, Polypodiidae) in the Mascarene archipelago, with ecological implications. Phytotaxa 375 (1): 001–058	10.11646/phytotaxa.375.1.1 🔗 HAL	Phytotaxa	EERI – DCFE
Pédron J, Chapelle E, Alunni B, Van Gijsegem F (2018) Transcriptome analysis of the Dickeya dadantii PecS regulon during the early stages of interaction with Arabidopsis thaliana. Mol Plant Pathol. 19(3): 647-663	10.1111/mpp.12549 🔗 HAL	Molecular Plant Pathology	CoMiC – DCFE
Porco D., Chang C.-H.,Dupont L.*, James S., Richard B. , Decaëns T. (2018) A reference library of DNA barcodes for the earthworms from Upper Normandy: Biodiversity assessment, new records, potential cases of cryptic diversity and ongoing speciation. Applied Soil Ecology, 124 : 362-371	10.1016/j.apsoil.2017.11.001 🔗 HAL	Applied Soil Ecology	BioDIS – DCFE
Sanders D., Thébault E.*, Kehoe R., van Veen F.J.F. (2018) Trophic redundancy reduces vulnerability to extinction cascades. Proc. Natl. Acad. Sci. USA, 115, 2419-2424	10.1073/pnas.1716825115	PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA	EERI – DCFE
Arditi R.^, Lobry C., Sari T. (2018) Asymmetric dispersal in the multi-patch logistic equation. Theoretical Population Biology, 120: 11-15	10.1016/j.tpb.2017.12.006 🔗 HAL 🔗 pdf	Theoretical Population Biology	EERI – DCFE
Lacombe G., Valentin C, Sounyafong P.’, De Rouw A, Soulileuth B.’, Silvera N, Pierret A, Sengtaheuanghoung O.’, Ribolzi O (2018). Linking crop structure, throughfall, soil surface conditions, runoff and soil detachment : 10 land uses analyzed in Northern Laos. Science of the Total Environment, 2018, 616, p. 1330-1338. ISSN 0048-9697.	10.1016/j.scitotenv.2017.10.185 🔗 HAL	Science of the Total Environment	CoMiC – DCFE ; F2ZC – Sols_ZC
Taheri S.~, James S.W., Roy V., Decaëns T., Williams B.W., Anderson F., Rougerie R., Chang C.-H., Brown G. G., Cunha L., Stanton D. W. G., Silva E.D., Chen J.-H., Lemmon A., Bartz M., Baretta D., Barois I., Lapied E., Coulis M., Dupont L. (2018) Complex taxonomy of the ‘brush tail’ peregrine earthworm Pontoscolex corethrurus. Molecular Phylogenetics and Evolution, 124, 60-70.	10.1016/j.ympev.2018.02.021 🔗 HAL	Molecular Phylogenetics and Evolution	BioDIS – DCFE
Pierret A.*, Lacombe G. (2018) Hydrologic regulation of plant rooting depth : breakthrough or observational conundrum ?. Proceedings of the National Academy of Sciences of the United States of America, 2018, 115 (12), p. E2669-E2670. ISSN 0027-8424.	10.1073/pnas.1801721115	PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA	CoMiC – DCFE
Lata J.-C., Dusza Y.~, Abbadie L., Barot S., Carmignac D., Gendreau E., Kraepiel Y., Mériguet J., Motard E., Raynaud X. (2018) Role of substrate properties in the provision of multifunctional green roof ecosystem services. Applied Soil Ecology 123: 464-468	10.1016/j.apsoil.2017.09.012 🔗 HAL 🔗 pdf	Applied Soil Ecology	EERI – DCFE ; EMS – DCFE
David A.~ , Boura A., Lata J.C., Rankovic A.~ , Kraepiel Y., Charlot C.°, Barot L., Abbadie L.* & Ngao J. 2017.Street trees in Paris are sensitive to spring and autumn precipitation and recent climate changes. Urban Ecosystems 21: 133-145.	10.1007/s11252-017-0704-z 🔗 HAL 🔗 pdf	Urban Ecosystems	EERI – DCFE ; EMS – DCFE
Huyghe D., Mouthereau F., Sebilo M., Vacherat A., Segalen L., Richard P., Biron P.* & Bariac T.* (2018). Impact of topography, climate and moisture sources on isotopic composition (δ18O & δD) of rivers in the Pyrenees: Implications for topographic reconstructions in small orogens. Earth and Planetary Science Letters. 484, 370-384	10.1016/j.epsl.2017.12.035 🔗 HAL 🔗 pdf	EARTH AND PLANETARY SCIENCE LETTERS	EMS – DCFE
Santschi F., Gounand I.*, Harvey E., and Altermatt F. (2018) Leaf litter diversity and structure of microbial decomposer communities modulate litter decomposition in aquatic system. Functional Ecology, 32(2): 522-532	10.1111/1365-2435.12980 🔗 HAL 🔗 pdf	Functional Ecology	EERI – DCFE
Simba L.D.’, Foord S.H.’, Thébault E.*, van Veen F.J.F., Joseph G.S.’, Seymour C.L.’ (2018) Indirect interactions between crops and natural vegetation through flower visitors: the importance of temporal as well as spatial spillover. Agriculture, Ecosystems & Environment, 253, 148-156.	10.1016/j.agee.2017.11.002 🔗 HAL 🔗 pdf	Agriculture Ecosystems & Environment	EERI – DCFE
Mathieu J., Caro G.~ & Dupont L. (2018) Methods for studying earthworm dispersal. Applied Soil Ecology, 123 : 339-344	10.1016/j.apsoil.2017.09.006 🔗 HAL 🔗 pdf	Applied Soil Ecology	BioDIS – DCFE ; EERI – DCFE
Srikanthasamy T.~, Leloup J., N’Dri A.-B., Barot S., Gervaix J., Koné A.W., Koffi K.F., Le Roux X., Raynaud X., Lata J.-C. (2018) Contrasting effects of grasses and trees on microbial N-cycling in an African humid savanna. Soil Biochemistry and Biology, 117: 153-163.	10.1016/j.soilbio.2017.11.016 🔗 HAL	Soil Biology & Biochemistry	EMS – DCFE
N’dri, A. B.`, Fongbe, M.`, Soro, T. D.`, Gignoux, J., Kone, M.`, Dosso, K.`, N’Dri, J.K.`, Koné, N.A.`,Barot, S. (2018). Principaux indices de l’intensité du feu dans une savane Guinéenne d’Afrique de l’Ouest. International Journal of Biological and Chemical Sciences, 12(1), 266.	10.4314/ijbcs.v12i1.21 🔗 HAL	International Journal of Biological and Chemical Sciences	EMS – DCFE
Soro, Y.`, N’Dri, A. B.`, Bakayoko, A.`, & Gignoux, J.* (2018). Analyse de la végétation dans un écotone Forêt-Savane d’Afrique de l’Ouest dans un contexte de boisement des savanes. Revue de l’Environnement et de la Biodiversité – PASRES, 3, 54–72.		Revue de l’Environnement et de la Biodiversité – PASRES	EMS – DCFE
Fougeyrollas R.~, Dolejšová K., Křivánek J., Sillam-Dussès D., Roisin Y., Hanus R., Roy V. (2018) Dispersal and mating strategies in two neotropical soil-feeding termites, Embiratermes neotenicus and Silvestritermes minutus (Termitidae, Syntermitinae). Insectes Sociaux, 65, 251-262.	10.1007/s00040-018-0606-y 🔗 HAL	Insectes Sociaux	BioDIS – DCFE ; ESEAE – EcoEvo
Terrigeol A.°,Indorf M.F.°,Jouhanique T.°,Tanguy F.°,Hoareau D.°,Rahimian V.°,Agésilas-Lequeux K.°,Baues R.°,Noualhguet M.°,Cheraiet A.°,Miedziejewski A.°, Bazot S., Lata J.C., Mathieu J., Hannot C., Dreuillaux J.M., Zanella A. (2018) Study of soil–vegetation relationships on the Butte Montceau in Fontainebleau, France: Pedagogical exercise and training report. Applied Soil Ecology, 123: 646-658	10.1016/j.apsoil.2017.07.021	Applied Soil Ecology	EERI – DCFE ; EMS – DCFE
Djukic I., et al.,Lata J.C.*, et al.,Yé L.~`, et al. (2018) Early stage litter decomposition across biomes. Science of the Total Environment, 628-629: 1369–1394	10.1016/j.scitotenv.2018.01.012 🔗 HAL 🔗 pdf	Science of the Total Environment	EMS – DCFE
Milcu A.; Puga-Freitas R.; Ellison A.M., Blouin M., Scheu S., Girin T., Freschet G.T., Rose L., Scherer-Lorenzen M., Barot S., Lata J-C., Cesarz S., Eisenhauer N., Gigon A.,Weigelt A., Hansart A., Greiner A., Pando A., Gessler A., Grignani C., Assandri D., Gleixner G., Le Galliard J-F., Urban-Mead K., Laura Zavattaro L., MüllerM.E.H., LangeM., Martin Lukac M., Bonkowski M., Mannerheim N., Buchmann N., Butenschoen O., Rotter P., Seyhun R., Devidal S., Kayler Z., and J Roy J.(2018).Genotypic variability enhances the reproducibility of an ecological study. Nature Ecology and Evolution. 2, p279–287	10.1038/s41559-017-0434-x 🔗 HAL	Nature Ecology & Evolution	BioDIS – DCFE ; EcoPhyS – IPE ; EMS – DCFE ; VPA – EcoEvo
Taheri S.~, Pelosi C.,Dupont L.* (2018) Harmful or useful ? A case study of the exotic peregrine earthworm morphospeciesPontoscolex corethrurus. Soil Biology and Biochemistry, 116: 277-289	10.1016/j.soilbio.2017.10.030 🔗 HAL 🔗 pdf	Soil Biology & Biochemistry	BioDIS – DCFE
Gounand I.*, Harvey E., Little C.J., and Altermatt F. (2018) Meta-ecosystems 2.0: rooting the theory into the field. Trends in Ecology and Evolution, 33(1): 36-46	10.1016/j.tree.2017.10.006 🔗 HAL 🔗 pdf	Trends in Ecology & Evolution	EERI – DCFE
N’Dri, A. B.`, Gignoux, J.*, & Konaté, S.` (2018). Food Preferences and Foraging Strategies of Wood-Feeding Termites in a West African Savanna. Current Science, 114(01), 186.	10.18520/cs/v114/i01/186-192 🔗 HAL 🔗 pdf	Current Science	EMS – DCFE
Hansen S.’, Roets F.’, Seymour C.L.’, Thébault E.*, van Veen F.J.F., Pryke J.S.’ (2018) Alien plants have greater impact than habitat fragmentation on native insect flower visitation networks. Diversity and Distributions, 24, 58-68.	10.1111/ddi.12656	Diversity and Distributions	EERI – DCFE
Robinne F.-N., Bladon K.D., Miller C., Parisien M.-A., Mathieu J.*, Flannigan M.D. (2018)A spatial evaluation of global wildfire-water risks to human and natural systems. Science of the Total Environment, 610-611:1193-1206	10.1111/mec.14102 🔗 HAL 🔗 pdf	Science of the Total Environment	EERI – DCFE
Malone E., Abbott B., Klaar M., Kidd C., Sebilo M.*, Milner A. & Pinay G. (2018). Decline in ecosystem δ13C and mid-successional nitrogen loss in a two-century postglacial chronosequence. Ecosystems. 21, 1659-1675	10.1007/s10021-018-0245-1 🔗 HAL 🔗 pdf	Ecosystems	EMS – DCFE
TROMEUR E., DOYEN L. (2018). Optimal Harvesting Policies Threaten Biodiversity in Mixed Fisheries. Environmental Modeling & Assessment, (24), 387–403	https://doi.org/10.1007/s10666-018-9618-2 🔗 HAL	Environmental Modeling & Assessment	DCFE
ROBINNE F.-N., BLADON K. D., MILLER C., PARISIEN M.-A., MATHIEU J., FLANNIGAN M. D. (2018). A spatial evaluation of global wildfire-water risks to human and natural systems. Science of the Total Environment, 610, 1193-1206	https://doi.org/10.1016/j.scitotenv.2017.08.112 🔗 HAL	Science of the Total Environment	DCFE
OSBORNE C., CHARLES-DOMINIQUE T., STEVENS N., BOND W., MIDGLEY G., LEHMANN C. (2018-10). Human impacts in African savannas are mediated by plant functional traits. New Phytologist, 220 (1)	https://doi.org/10.1111/nph.15236 🔗 HAL	New Phytologist	DCFE
GAGLIO D., COOK T. R., SHERLEY R. B., RYAN P. G. (2018). How Many Can You Catch? Factors Influencing the Occurrence of Multi-Prey Loading in Provisioning Greater Crested Terns. Ostrich, 89 (2), 145–149	https://doi.org/10.2989/00306525.2018.1439116 🔗 HAL	Ostrich	DCFE
Agapit, C.~, Gigon, A., Puga-Freitas, R., Zeller, B., Blouin, M. Plant-earthworm interactions: influence of age and proportion of casts in the soil on plant growth, morphology and nitrogen uptake. Plant Soil 424, 49–61 (2018).	10.1007/s11104-017-3544-y 🔗 HAL	PLANT AND SOIL	BioDIS – DCFE ; EcoPhyS – IPE
Tromeur, E.~ and Loeuille, N.* (2017), Balancing yield with resilience and conservation objectives in harvested predator–prey communities. Oikos, 126: 1780-1789	10.1111/oik.03985 🔗 HAL 🔗 pdf	Oikos	EERI – DCFE
Abed R, Kohls K, Leloup J*, De Beer D (2018) Abundance and diversity of aerobic heterotrophic microorganisms and their interaction with cyanobacteria in the oxic layer of an intertidal hypersaline cyanobacterial mat. FEMS Microbiol Ecol 98	10.1093/femsec/fix183 🔗 HAL	FEMS Microbiology Ecology	EMS – DCFE
Rego‐Costa, A., Débarre, F.*, & Chevin, L. M. (2018). Chaos and the (un) predictability of evolution in a changing environment. Evolution, 72(2), 375-385	10.1111/evo.13407	Evolution	EERI – DCFE
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Médoc, V., Thuillier, L.° & Spataro, T.* (2018) Opportunistic omnivory impairs our ability to predict invasive species impacts from functional response comparisons. Biol Invasions, 20: 1307–1319	10.1007/s10530-017-1628-5	Biological Invasions	EERI – DCFE
Niboyet, A., G. Bardoux, S. Barot*, and J. M. G. Bloor. 2017. Elevated CO2 mediates the short-term drought recovery of ecosystem function in low-diversity grassland systems. Plant & Soil 420:289-302.	10.1007/s11104-017-3377-8 🔗 HAL	PLANT AND SOIL	EMS – DCFE
Fourcade Y.*, Besnard A.G., Secondi J. (2018) Paintings predict the distribution of species, or the challenge of selecting environmental predictors and evaluation statistics. Global Ecology and Biogeography, 27: 245-256	10.1111/geb.12684 🔗 HAL	Global Ecology and Biogeography	BioDIS – DCFE
Toussaint A., Van Gijsegem F.* (2017) Extension of the transposable bacterial virus family: two genomic organisations among phages and prophages with a Tn552-related transposase. Research in Microbiology, 169: 9	10.1016/j.resmic.2017.11.002 🔗 HAL	Research in Microbiology	CoMiC – DCFE
Jouquet P., Pando A.; Aroui H.; Harit A.`^; Capowiez Y.; Bottinelli N.2017. Evidence from Mid-Infrared Spectroscopy (MIRS) that the biological fingerprints of Odontotermes obesus termite colonies change according to their geographical location and age. (2017). Insectes Sociaux 65:77–84	10.1007/s00040-017-0589-0 🔗 HAL	Insectes Sociaux	BioDIS – DCFE ; FEST – Sols_ZC
Deeb M.~, Desjardins T., Podwojewski P., Pando A., Blouin M., Lerch T.Z. (2017) Interactive effects of compost, plants and earthworms on aggregation in constructed Technosols. Geoderma 305: 305–313	10.1016/j.geoderma.2017.06.014 🔗 HAL	Geoderma	BioDIS – DCFE ; FEST – Sols_ZC
Marichal, R.; Praxedes, C.; Decaens, T.; Grimaldi, M.; Oszwald, J.; Brown, G. G.; Desjardins, T.; da Silva Junior, M. L.; Feijoo Martinez, A.; Oliveira, M. N. D.; Velasquez, E.; Lavelle, P.* (2017) Earthworm functional traits, landscape degradation and ecosystem services in the Brazilian Amazon deforestation arc. EUROPEAN JOURNAL OF SOIL BIOLOGY, 83, 43-51	10.1016/j.ejsobi.2017.09.003	European Journal of Soil Biology	BioDIS – DCFE ; FEST – Sols_ZC
Nunan, N.*, 2017. The microbial habitat in soil: Scale, heterogeneity and functional consequences. Journal of Plant Nutrition and Soil Science 180, 425–429.	10.1002/jpln.201700184 🔗 HAL 🔗 pdf	Journal of Plant Nutrition and Soil Science	BioDIS – DCFE
Loeuille, N., Le Mao, T. & Barot, S. Effects of plant evolution on nutrient cycling couple aboveground and belowground processes. Theor Ecol 10, 117–127 (2017)	10.1007/s12080-016-0315-y 🔗 HAL	Theoretical Ecology	EERI – DCFE ; EMS – DCFE
Ropars, L., Dajoz, I & Geslin, B. 2017. La ville un désert pour les abeilles sauvages ? J. Bot. Soc. Bot. France 79, 1‑7.	🔗 HAL 🔗 pdf	Journal de Botanique Société Botanique de France	EERI – DCFE
Desaegher, J., Nadot, S, Dajoz, I & Colas, B. 2017. Buzz in Paris: Flower production and plant-pollinator interactions in plants from contrasted urban and rural origins. Genetica	10.1007/s10709-017-9993-7 🔗 HAL	Genetica	EERI – DCFE
Flacher, F.~, Hansard, A., Motard, E., Fofana, A.M.°, Vincent, O., Geslin, B., Dajoz, I., Raynaud, X. (2017). Does competition with wind-pollinated species alter Echium plantagineum ’s attractiveness to a common pollinator Bombus terrestris ? Ecological Entomology 42:617–628.	10.1111/een.12426 🔗 HAL 🔗 pdf	Ecological Entomology	EERI – DCFE ; EMS – DCFE
Nunan, N., Leloup, J., Ruamps, L.S.~, Pouteau, V., Chenu, C., 2017. Effects of habitat constraints on soil microbial community function. Scientific Reports 7.	10.1038/s41598-017-04485-z 🔗 HAL 🔗 pdf	Scientific Reports	BioDIS – DCFE ; EMS – DCFE
Gignoux, J., Chérel, G.~, Davies, I. D., Flint, S. R., & Lateltin, E. (2017). Emergence and complex systems: The contribution of dynamic graph theory. Ecological Complexity, 31, 34–49.	10.1016/j.ecocom.2017.02.006 🔗 HAL 🔗 pdf	Ecological Complexity	EMS – DCFE
Iltis, C.°, Spataro, T.*, Wattier, R. & Médoc, V. (2018) Parasitism may alter functional response comparisons: a case study on the killer shrimp Dikerogammarus villosus and two non-invasive gammarids. Biol Invasions,20: 619–632	10.1007/s10530-017-1563-5 🔗 HAL	Biological Invasions	EERI – DCFE
Talovskaya A., Yazikov E., Filimonenko E., Lata J.C.*, Kim J.B., Shakhova T. (2017) Characterization of solid airborne particles deposited in snow in the vicinity of urban fossil fuel thermal power plant (Western Siberia). Environmental Technology, 39: 2288-2303	10.1080/09593330.2017.1354075 🔗 HAL	Environmental Technology	EMS – DCFE
Foti L.~, Dubs F.^, Gignoux J., Lata J.C., Lerch T. Z, Mathieu J., Nold F., Nunan N.,Raynaud X., Abbadie L., Barot S. (2017) Trace metal concentrations along a gradient of urban pressure in forest and lawn soils of the Paris region (France). Science of the Total Environment, 598: 938-948	10.1016/j.scitotenv.2017.04.111 🔗 HAL	Science of the Total Environment	BioDIS – DCFE ; EERI – DCFE ; EMS – DCFE
Subbarao G.V., J. Arango`, K. Masahiro, A.M. Hooper, T. Yoshihashi, Y. Ando, K. Nakahara, S. Deshpande`, I. Ortiz-Monasterio, M. Ishitani, M. Peters, N. Chirinda, L. Wollenberg, J.C. Lata*, B. Gerard, S. Tobita, I.M. Rao`, H.J. Braun, V. Kommerell, J. Tohme, M. Iwanaga (2017) Genetic mitigation strategies to tackle agricultural GHG emissions: The case for biological nitrification inhibition technology. Plant Science, 262: 165-168	10.1016/j.plantsci.2017.05.004 🔗 HAL	Plant Science	EMS – DCFE
Yé L.~`, Lata J.-C., Masse D., Nacro H.B.`, Kissou R.`, Diallo N.H.`, Barot S. (2017) Contrasted effects of annual and perennial grasses on soil chemical and biological characteristics of a grazed Sudanian savanna. Applied Soil Ecology, 113: 155-165	10.1016/j.apsoil.2017.02.003 🔗 HAL	Applied Soil Ecology	EMS – DCFE
Barot S., Allard V., Cantarel A., Enjalbert J., Gauffreteau A., Goldringer I., Lata J.-C., Le Roux X., Niboyet A.*, Porcher E. (2017) Designing mixtures of varieties for multifunctional agriculture with the help of ecology. A review. Agronomy for Sustainable Development, 37: 13.	10.1007/s13593-017-0418-x 🔗 HAL 🔗 pdf	Agronomy for Sustainable Development	EMS – DCFE
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Leloup, J., Baude, M.~, Nunan, N., Meriguet, J., Dajoz, I., Le Roux, X., Raynaud, X. (2018) Unravelling the effects of plant species diversity and aboveground litter input on soil bacterial communities. Geoderma 317, 1–7.	10.1016/j.geoderma.2017.12.018 🔗 HAL	Geoderma	BioDIS – DCFE ; EERI – DCFE ; EMS – DCFE
Vergnes A.^, Blouin M., Muratet A, Lerch T.Z.*, Mendez-Millan M., Rouelle-Castrec M., Dubs F.^ (2017) Initial conditions during Technosol implementation shape earthworms and ants diversity. Landscape and Urban Planning 159 : 32-41	10.1016/j.landurbplan.2016.10.002 🔗 HAL	Landscape and Urban Planning	BioDIS – DCFE
Agapit C.~, Gigon A.*, Blouin M. (2017) Earthworm effect on root morphology in a split-root system. Plant Biosystems 780-786	10.1080/11263504.2017.1338627 🔗 HAL	Plant Biosystems	BioDIS – DCFE
Zancarini A.^, Echenique-Subiabre I.~, Debroas D., Taïb N., Quiblier C., Humbert J.F.* (2017)Deciphering biodiversity and interactions between bacteria andmicroeukaryotes within epilithic biofilms from the Loue River, France. Scientific Reports 7, 4344	10.1038/s41598-017-04016-w 🔗 HAL 🔗 pdf	Scientific Reports	CoMiC – DCFE
Kim, M.`, L. Boithias, K. H. Cho`, N. Silvera, C. Thammahacksa, K. Latsachack, E. Rochelle-Newall, O. Sengtaheuanghoung, A. Pierret*, Y. A. Pachepsky & O. Ribolzi, 2017. Hydrological modeling of Fecal Indicator Bacteria in a tropical mountain catchment. Water Research 119:102-113	10.1016/j.watres.2017.04.038 🔗 HAL	Water Research	CoMiC – DCFE ; F2ZC – Sols_ZC
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Manivanh, L`., A. Pierret, S. Rattanavong`, O. Kounnavongsa, Y`. Buisson, I. Elliott, J.-L. Maeght, K. Xayyathip`, J. Silisouk`, M. Vongsouvath`, R. Phetsouvanh`, P. N. Newton, G. Lacombe, O. Ribolzi, E. Rochelle-Newall* & D. A. B. Dance, 2017. Burkholderia pseudomallei in a lowland rice paddy: seasonal changes and influence of soil depth and physico-chemical properties. Scientific Reports 7:3031	10.1038/s41598-017-02946-z 🔗 HAL 🔗 pdf	Scientific Reports	CoMiC – DCFE ; F2ZC – Sols_ZC
Lerch T.Z., Chenu C., Dignac M.-F., Barriuso E., Mariotti A. (2017) Biofilm vs planktonic lifestyle: consequences on pesticide 2,4-D biodegradation by Cupriavidus necator JMP134. Frontiers in Microbiology 8 : 90	10.3389/fmicb.2017.00904 🔗 HAL 🔗 pdf	Frontiers in Microbiology	BioDIS – DCFE ; CoMiC – DCFE
MANIVANH, L.’, PIERRET A., RATTANAVONG, S.’, KOUNNAVONGSA, O.’, BUISSON, Y., ELLIOTT, I., MAEGHT, J.-L., XAYYATHIP, K., SILISOUK, J.’, VONGSOUVATH, M.’, PHETSOUVANH, R.’, NEWTON, P.N., LACOMBE, G., RIBOLZI, O., ROCHELLE-NEWALL*, E., DANCE, D.A.B. (2017) Burkholderia pseudomallei in a lowland rice paddy: seasonal changes and influence of soil depth and physico-chemical properties. Scientific Reports – Nature, 2017, 7, p. art. 3031 [11 p.].	10.1038/s41598-017-02946-z 🔗 HAL 🔗 pdf	Scientific Reports	CoMiC – DCFE
Meunier F., Rothfuss Y., Bariac T., Biron P., Richard P.*, Durand JL., Couvreur C., Vanderborght J., Javaux. M. (2017): Measuring and modeling hydraulic lift of Lolium multiflorum under semi-controlled conditions using water stable isotopes. Vadose Zone Journal 17(1)	10.2136/vzj2016.12.0134 🔗 HAL 🔗 pdf	Vadose Zone Journal	EMS – DCFE
Débarre, F.* (2017). Fidelity of parent-offspring transmission and the evolution of social behavior in structured populations. Journal of Theoretical Biology, 420, 26-35	10.1016/j.jtbi.2017.02.027 🔗 HAL 🔗 pdf	Journal of Theoretical Biology	EERI – DCFE
IMDIRAKPHOL S.’, ZAZZO A., AUETRAKULVIT P.’, TIAMTINKRIT C.’, PIERRET A.*, FORESTIER H., ZEITOUN V. (2017) The perforated stones of the Doi Pha Kan burials (Northern Thailand): A Mesolithic singularity? Comptes rendus Palevol (2017) Volume 16, Issue 3, April–May 2017, Pages 351-361	10.1016/j.crpv.2016.12.003 🔗 HAL 🔗 pdf	Comptes rendus Palevol	CoMiC – DCFE
KIM, J.H., FOURCAUD, T., JOURDAN, C., MAEGHT, J.-L., MAO, Z., METAYER, J., MEYLAN, L., PIERRET A., RAPIDEL, B., ROUPSARD, O., de ROUW, A.*, VILLATORO SANCHEZ, M., WANG, Y., STOKES, A. (2017) Vegetation drives slope stability and its variability through hydrological impacts. Geophys. Res. Lett., 44: 4897-4907.	10.1002/2017gl073174 🔗 HAL	Geophysical Research Letters	CoMiC – DCFE ; F2ZC – Sols_ZC
Dusza, Y.~, Barot, S., Kraepiel, Y., Lata, J.-C., Abbadie, L., Raynaud, X.* (2017) Multifunctionality is affected by interactions between green roof plant species, substrate depth, and substrate type. Ecology and Evolution 7:2357–2369.	10.1002/ece3.2691 🔗 HAL 🔗 pdf	Ecology and Evolution	EMS – DCFE
Simonin M.°, N. Nunan, J. M. G. Bloor, V. Pouteau, and A. Niboyet (2017) Short-term responses and resistance of soil microbial community structure to elevated CO2 and N addition in grassland mesocosms. FEMS Microbiology Letters 364(9)	10.1093/femsle/fnx077 🔗 HAL 🔗 pdf	FEMS Microbiology Letters	BioDIS – DCFE ; EMS – DCFE
Dignac, M.-F., Derrien, D., Barré, P., Barot, S., Cécillon, L., Chenu, C., Chevallier, T., Freschet, G.T., Garnier, P., Guenet, B., Hedde, M., Klumpp, K., Lashermes, G., Maron, P.-A., Nunan, N.*, Roumet, C., Basile-Doelsch, I., 2017. Increasing soil carbon storage: mechanisms, effects of agricultural practices and proxies. A review.Agronomy for Sustainable Development 37	10.1007/s13593-017-0421-2 🔗 HAL 🔗 pdf	Agronomy for Sustainable Development	BioDIS – DCFE ; CoMiC – DCFE ; EMS – DCFE
Van Gijsegem F., Pédron J., Patrit O., Simond-Côte E., Maia-Grondard A., Pétriacq P., Gonzalez R., Blottière L.^, Kraepiel Y.* (2017) Manipulation of ABA content in Arabidopsis thaliana modifies sensitivity and oxidative stress response to Dickeya dadantii and influences peroxidase activity. Front. Plant Sci.: 8 : 456	10.3389/fpls.2017.00456 🔗 HAL 🔗 pdf	Frontiers in Plant Science	CoMiC – DCFE ; EMS – DCFE
Fougeyrollas R.~, Křivánek J., Roy V., Dolejšová K., Frechault S., Roisin Y., Hanus R., Sillam-Dussès D. (2017). Asexual queen succession mediates an accelerated colony life cycle in the termite Silvestritermes minutus. Molecular Ecology, 26, 3295–3308	10.1111/mec.14095 🔗 HAL	Molecular Ecology	BioDIS – DCFE ; ESEAE – EcoEvo
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Debroas D., Domaizon I., Humbert J.F.*,Jardillier L., Lepère C., Oudart A. and Taïb X. (2017) Overview of freshwater microbial eukaryotesdiversity: a first analysis of publicly available metabarcoding data. FEMS Microbiology Ecology, 93, 4	10.1093/femsec/fix023 🔗 HAL	FEMS Microbiology Ecology	CoMiC – DCFE
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Doupoux, C., Merdy, P., Montes, C.R., Nunan, N*., Melfi, A.J., Pereira, O.J.R., Lucas, Y. (2017) Modelling the genesis of equatorial podzols: age and implications for carbon fluxes. Biogeosciences 14, 2429–2440.	10.5194/bg-2016-545 🔗 HAL	Biogeosciences	BioDIS – DCFE
Panettieri, M.; Rumpel, C.; Dignac, M. -F.; Chabbi, A. (2017) Does grassland introduction into cropping cycles affect carbon dynamics through changes of allocation of soil organic matter within aggregate fractions? SCIENCE OF THE TOTAL ENVIRONMENT, 576, 251-263	10.1016/j.scitotenv.2016.10.073 🔗 HAL 🔗 pdf	SCIENCE OF THE TOTAL ENVIRONMENT	CoMiC – DCFE ; FEST – Sols_ZC
Zhao, Q., Jian, S., Nunan, N., Maestre, F.T., Tedersoo, L., He, J., Wei, H., Tan, X., Shen, W., 2017. Altered precipitation seasonality impacts the dominant fungal but rare bacterial taxa in subtropical forest soils. Biology & Fertility of Soils, 53, 231–245.	10.1007/s00374-016-1171-z 🔗 HAL	Biology and Fertility of Soils	BioDIS – DCFE
Pancrace P., Barny MA., Ueoka R., Calteau A., Scalvenzi T., Pédron J., Barbe V., Piel J., Humbert JF.*, Gugger M (2017) Insights into the Planktothrix genus: Genomic and metabolic comparison of benthic and planktic strains. Scientific reports.7, 41181	10.1038/srep41181 🔗 HAL 🔗 pdf	Scientific Reports	CoMiC – DCFE
Tramoy R., Sebilo M.*, Nguyen TT. & Schnyder J. (2017). Carbon and nitrogen dynamics in decaying wood: paleoenvironmental implications.Environmental Chemistry. 14, 9-18	10.1071/en16049 🔗 HAL 🔗 pdf	Environmental Chemistry	EMS – DCFE
Gontharet S., Crémière A.^, Blanc-Valleron M-R., Sebilo M.*, Gros O., Laverman A.M. & Desailly D. (2017). Relation between sediment characteristics and the presence of microbial mats in a marine mangrove from the Manche à Eau lagoon (Guadeloupe). Journal of Soils and Sediments. 17, 1999-2010	10.1007/s11368-016-1555-6 🔗 HAL 🔗 pdf	Journal of Soils and Sediments	EMS – DCFE
Crémière A.^, Strauss H., Sebilo M.*, Hong W-L., Gros O., Schmidt S., Tocny J., Henry F., Gontharet S. & Laverman A.M (2017). Sulfur diagenesis under rapid accumulation of organic-rich sediments in a marine mangrove from Guadeloupe (French West Indies). Chemical Geology. 454, 67-79	10.1016/j.chemgeo.2017.02.017 🔗 HAL 🔗 pdf	Chemical Geology	EMS – DCFE
Maurer A-F.^, Person A., Zazzo A., Sebilo M.*, Balter V., Le Cornec F., Zeitoun V., Dufour E., Schmidt A., de Rafélis M., Ségalen L & Bedaux R. (2017). Geochemical identity of pre-Dogon and Dogon populations at Bandiagara (Mali, 11th-20th cent. AD). Journal of Archaeological Science: Reports. 14, 289-301	10.1016/j.jasrep.2017.05.037 🔗 HAL	Journal of Archaeological Science	EMS – DCFE
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D.; Granjon, L.; Grass, I.; Gray, C. L.; Grogan, J.; Gu, W.; Guardiola, M.; Gunawardene, N. R.; Gutierrez, A. G.; Gutiérrez-Lamus, D. L.; Haarmeyer, D. H.; Hanley, M. E.; Hanson, T.; Hashim, N. R.; Hassan, S. N.; Hatfield, R. G.; Hawes, J. E.; Hayward, M. W.; Hébert, C.; Helden, A. J.; Henden, J.-A.; Henschel, P.; Hernández, L.; Herrera, J. P.; Herrmann, F.; Herzog, F.; Higuera-Diaz, D.; Hilje, B.; Höfer, H.; Hoffmann, A.; Horgan, F. G.; Hornung, E.; Horváth, R.; Hylander, K.; Isaacs-Cubides, P.; Ishida, H.; Ishitani, M.; Jacobs, C. T.; Jaramillo, V. J.; Jauker, B.; Hernández, F. J.; Johnson, M. F.; Jolli, V.; Jonsell, M.; Juliani, S. N.; Jung, T. S.; Kapoor, V.; Kappes, H.; Kati, V.; Katovai, E.; Kellner, K.; Kessler, M.; Kirby, K. R.; Kittle, A. M.; Knight, M. E.; Knop, E.; Kohler, F.; Koivula, M.; Kolb, A.; Kone, M.; Kőrösi, Á.; Krauss, J.; Kumar, A.; Kumar, R.; Kurz, D. J.; Kutt, A. S.; Lachat, T.; Lantschner, V.; Lara, F.; Lasky, J. R.; Latta, S. C.; Laurance, W. F.; Lavelle, P.*; Le Féon, V.; LeBuhn, G.; Légaré, J.-P.; Lehouck, V.; Lencinas, M. V.; Lentini, P. E.; Letcher, S. G.; Li, Q.; Litchwark, S. A.; Littlewood, N. A.; Liu, Y.; Lo-Man-Hung, N.; López-Quintero, C. A.; Louhaichi, M.; Lövei, G. L.; Lucas-Borja, M. E.; Luja, V. H.; Luskin, M. S.; MacSwiney G, M. C.; Maeto, K.; Magura, T.; Mallari, N. A.; Malone, L. A.; Malonza, P. K.; Malumbres-Olarte, J.; Mandujano, S.; Måren, I. E.; Marin-Spiotta, E.; Marsh, C. J.; Marshall, E. J. P.; Martínez, E.; Martínez Pastur, G.; Moreno Mateos, D.; Mayfield, M. M.; Mazimpaka, V.; McCarthy, J. L.; McCarthy, K. P.; McFrederick, Q. S.; McNamara, S.; Medina, N. G.; Medina, R.; Mena, J. L.; Mico, E.; Mikusinski, G.; Milder, J. C.; Miller, J. R.; Miranda-Esquivel, D. R.; Moir, M. L.; Morales, C. L.; Muchane, M. N.; Muchane, M.; Mudri-Stojnic, S.; Munira, A. N.; Muoñz-Alonso, A.; Munyekenye, B. F.; Naidoo, R.; Naithani, A.; Nakagawa, M.; Nakamura, A.; Nakashima, Y.; Naoe, S.; Nates-Parra, G.; Navarrete Gutierrez, D. A.; Navarro-Iriarte, L.; Ndang’ang’a, P. K.; Neuschulz, E. L.; Ngai, J. T.; Nicolas, V.; Nilsson, S. G.; Noreika, N.; Norfolk, O.; Noriega, J. A.; Norton, D. A.; Nöske, N. M.; Nowakowski, A. J.; Numa, C.; O’Dea, N.; O’Farrell, P. J.; Oduro, W.; Oertli, S.; Ofori-Boateng, C.; Oke, C. O.; Oostra, V.; Osgathorpe, L. M.; Otavo, S. E.; Page, N. V.; Paritsis, J.; Parra-H, A.; Parry, L.; Pe’er, G.; Pearman, P. B.; Pelegrin, N.; Pélissier, R.; Peres, C. A.; Peri, P. L.; Persson, A. S.; Petanidou, T.; Peters, M. K.; Pethiyagoda, R. S.; Phalan, B.; Philips, T. K.; Pillsbury, F. C.; Pincheira-Ulbrich, J.; Pineda, E.; Pino, J.; Pizarro-Araya, J.; Plumptre, A. J.; Poggio, S. L.; Politi, N.; Pons, P.; Poveda, K.; Power, E. F.; Presley, S. J.; Proença, V.; Quaranta, M.; Quintero, C.; Rader, R.; Ramesh, B. R.; Ramirez-Pinilla, M. P.; Ranganathan, J.; Rasmussen, C.; Redpath-Downing, N. A.; Reid, J. L.; Reis, Y. T.; Rey Benayas, J. M.; Rey-Velasco, J. C.; Reynolds, C.; Ribeiro, D. B.; Richards, M. H.; Richardson, B. A.; Richardson, M. J.; Ríos, R. M.; Robinson, R.; Robles, C. A.; Römbke, J.; Romero-Duque, L. P.; Rös, M.; Rosselli, L.; Rossiter, S. J.; Roth, D. S.; Roulston, T. H.; Rousseau, L.; Rubio, A. V.; Ruel, J.-C.; Sadler, J. P.; Sáfián, S.; Saldaña-Vázquez, R. A.; Sam, K.; Samnegård, U.; Santana, J.; Santos, X.; Savage, J.; Schellhorn, N. A.; Schilthuizen, M.; Schmiedel, U.; Schmitt, C. B.; Schon, N. L.; Schüepp, C.; Schumann, K.; Schweiger, O.; Scott, D. M.; Scott, K. A.; Sedlock, J. L.; Seefeldt, S. S.; Shahabuddin, G.; Shannon, G.; Sheil, D.; Sheldon, F. H.; Shochat, E.; Siebert, S. J.; Silva, F. A. B.; Simonetti, J. A.; Slade, E. M.; Smith, J.; Smith-Pardo, A. H.; Sodhi, N. S.; Somarriba, E. J.; Sosa, R. A.; Soto Quiroga, G.; St-Laurent, M.-H.; Starzomski, B. M.; Stefanescu, C.; Steffan-Dewenter, I.; Stouffer, P. C.; Stout, J. C.; Strauch, A. M.; Struebig, M. J.; Su, Z.; Suarez-Rubio, M.; Sugiura, S.; Summerville, K. S.; Sung, Y.-H.; Sutrisno, H.; Svenning, J.-C.; Teder, T.; Threlfall, C. G.; Tiitsaar, A.; Todd, J. H.; Tonietto, R. K.; Torre, I.; Tóthmérész, B.; Tscharntke, T.; Turner, E. C.; Tylianakis, J. M.; Uehara-Prado, M.; Urbina-Cardona, N.; Vallan, D.; Vanbergen, A. J.; Vasconcelos, H. L.; Vassilev, K.; Verboven, H. A. F.; Verdasca, M. J.; Verdú, J. R.; Vergara, C. H.; Vergara, P. M.; Verhulst, J.; Virgilio, M.; Vu, L. V.; Waite, E. M.; Walker, T. R.; Wang, H.-F.; Wang, Y.; Watling, J. I.; Weller, B.; Wells, K.; Westphal, C.; Wiafe, E. D.; Williams, C. D.; Willig, M. R.; Woinarski, J. C. Z.; Wolf, J. H. D.; Wolters, V.; Woodcock, B. A.; Wu, J.; Wunderle Jr, J. M.; Yamaura, Y.; Yoshikura, S.; Yu, D. W.; Zaitsev, A. S.; Zeidler, J.; Zou, F.; Collen, B.; Ewers, R. M.; Mace, G. M.; Purves, D. W.; Scharlemann, J. P. W.; Purvis, A. The Database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) Project. Ecology and Evolution (2017) 7: 145–188	10.1002/ece3.2579 🔗 HAL 🔗 pdf	Ecology and Evolution	BioDIS – DCFE
MOXLEY C., LAMMERS W., VAN VEEN F. J. F., THEBAULT E., ESLER K. J., SEYMOUR C. L. (2017). A major subtropical fruit pest accumulates in crop fields and spills over to a wild host. Agriculture, Ecosystems and Environment, 242, 102-109	https://doi.org/10.1016/j.agee.2017.03.024 🔗 HAL	Agriculture, Ecosystems and Environment	DCFE
MILANO V., CORTET J., BALDANTONI D., BELLINO A., DUBS F., NAHMANI J., STRUMIA S., MAISTO G. (2017). Collembolan Biodiversity in Mediterranean Urban Parks: Impact of History, Urbanization, Management and Soil Characteristics. Applied Soil Ecology, 119, 428–437	https://doi.org/10.1016/j.apsoil.2017.03.022 🔗 HAL	Applied Soil Ecology	DCFE
PAULI B. D., KOLDING J., JEYAKANTH G., HEINO M. (2017). Effects of ambient oxygen and size-selective mortality on growth and maturation in guppies. Conservation Physiology, 5	https://doi.org/10.1093/conphys/cox010 🔗 HAL	Conservation Physiology	DCFE
BROSE U., BLANCHARD J. L., EKLOF A., GALIANA IBAÑEZ N., HARTVIG M., HIRT M. R., KALINKAT G., NORDSTROM M. C., O’GORMAN E. J., RALL B. C., SCHNEIDER F. D., THEBAULT E., JACOB U. (2017). Predicting the consequences of species loss using size-structured biodiversity approaches. Biological Reviews, 92 (2), 684-697	https://doi.org/10.1111/brv.12250 🔗 HAL	Biological Reviews	DCFE
DIAZ PAULI B., SIH A. (2017-03). Behavioural responses to human-induced change: Why fishing should not be ignored. Evolutionary Applications, 10 (3), 231 – 240	https://doi.org/10.1111/eva.12456 🔗 HAL	Evolutionary Applications	DCFE
TERRAT S., HORRIGUE W., DEQUIETD S., SABY N., LELIEVRE M., NOWAK V., TRIPIED J., REGNIER T., JOLIVET C., ARROUAYS D., WINCKER P., CRUAUD C., KARIMI B., BISPO A., MARON P.-A., CHEMIDLIN PREVOST-BOURE N., RANJARD L. (2017-10-23). Mapping and predictive variations of soil bacterial richness across France. PLoS ONE, 12 (0190128), 1-19	https://doi.org/10.1371/journal.pone.0186766 🔗 HAL	PLoS ONE	DCFE
Cronin AL, Loeuille N, Monnin T (2016) Strategies of offspring investment and dispersal in a spatially structured environment: a theoretical study using ants. BMC Ecology 16:4	10.1186/s12898-016-0058-z 🔗 HAL 🔗 pdf	BMC Ecology	EERI – DCFE ; ESEAE – EcoEvo

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Équipes du département | Actualités du département | Publications du département | Membres du département | ↑ Revenir en haut de la page

Membres du département

Nom Prénom	Corps	Employeur	Département et Équipe	Adresse	Téléphone	Mél
ABBADIE Luc	PU	S-U	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 416	(+33) 01-44-27-25-45	luc.abbadie@upmc.fr
ARDITI Roger	Chercheur bénévole	S-U	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 5e étage – bureau : 520	(+33) 01-44-27-25-69	roger.arditi@sorbonne-universite.fr
AVET Marion	CDD IR	INRAE	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e ISTEP – étage – bureau :		marion.avet@inrae.fr
BAKHOS Melissa	Doctorante	S-U	Équipe CoMiC du Département DCFE ; Équipe FEST du Département Sols_ZC	Campus Pierre et Marie Curie – Paris 5e Tour 44-34 – 5e étage – bureau : 512		melissa.bakhos@sorbonne-universite.fr
BARNY Marie-Anne	DR	INRAE	Équipe CoMiC du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 408	(+33) 01-44-27-32-94	marie-anne.barny@upmc.fr
BAROT Sébastien	DR	IRD	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 208	(+33) 01-44-27-47-42	sebastien.barot@ird.fr
BAUDE Mathilde	MC	Univ. d’Orléans	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-34 – 5e étage – bureau : 514	(+33) 01-44-27-45-26	mathilde.baude@univ-orleans.fr
BEAU Rémi	CR	CNRS	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 220	(+33) 01-44-47-35-11	remi.beau@upmc.fr
BECU Thomas	Doctorant	Univ. Clermont Auvergne	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 218		thomas.becu@inrae.fr
BELIN Marie	Doctorante	S-U	Équipe EERI du Département DCFE ; Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 218	(+33) 01-44-27-47-30	marie.belin@sorbonne-universite.fr
BLAREAU Elsa	Doctorante	S-U	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 413	(+33) 01-44-27-32-49	elsa.blareau@sorbonne-universite.fr
CANTO Pierre-Yves	AI	CNRS	Équipe CoMiC du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 414	(+33) 01-44-27-31-45	pierre-yves.canto@upmc.fr
CARLIER Vincent	CDD AI	S-U	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 413	(+33) 0695259828	vincent.carlier@sorbonne-universite.fr
CARMIGNAC David	AI	CNRS	Équipe EERI du Département DCFE ; Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 206	(+33) 01-44-27-47-95	david.carmignac@sorbonne-universite.fr
CHARBERET Samuel	Doctorant	S-U	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 413	(+33) 01-44-27-32-49	samuel.charberet@upmc.fr
COLOMBINI Gabin	Post-doctorant	IRD	Équipe CoMiC du Département DCFE ; Équipe FEST du Département Sols_ZC	Campus Pierre et Marie Curie – Paris 5e Tour 44-34 – 5e étage – bureau : 510	(+33) 01-44-27-34-03	gabin.colombini@sorbonne-universite.fr
DAJOZ Isabelle	PU	Univ. Paris Cité	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 5e étage – bureau : 518	(+33) 01-44-27-38-09	isabelle.dajoz@univ-paris-diderot.fr
DE FOUCHIER Arthur	ATER	S-U	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 3e étage – bureau : 306	(+33) 01-44-27-38-37	arthur.de_fouchier@sorbonne-universite.fr
DIGNAC Marie-France	DR	INRAE	Équipe CoMiC du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-34 – 5e étage – bureau : 504	(+33) 01-44-27-51-71	marie-france.dignac@inrae.fr
DUPONT Lise	PU	UPEC	Équipe BioDIS du Département DCFE	Univ. Paris Est Créteil bâtiment P – 4e étage – bureau : 418	(+33) 01-45-17-16-64	lise.dupont@u-pec.fr
FELBACQ Axel	AI	CNRS	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-34 – 5e étage – bureau : 510	(+33) 01-44-27-34-03	axel.felbacq@sorbonne-universite.fr
FOUCAULT Pierre	Doctorant	MNHN	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 1	(+33) 01-40-79-31-79	pierre.foucault@mnhn.fr
FOURCADE Yoan	MC	UPEC	Équipe BioDIS du Département DCFE	Univ. Paris Est Créteil bâtiment P – 4e étage – bureau : 422	(+33) 01-45-17-14-69	yoan.fourcade@u-pec.fr
FUENTES Annabelle	T	S-U	Pôle technique du Département EcoSens ; Services communs du Département EcoSens ; Services communs du Département DCFE ; Services communs du Département ECOEVO	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 3e étage – bureau : 308	(+33) 01-44-27-38-25	anabelle.fuentes@upmc.fr
GASQUE Mégane	Doctorante	S-U	Équipe CoMiC du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 0		megane.gasque@ird.fr
GENDREAU Emmanuel	MC	S-U	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 212	(+33) 01-44-27-41-06	emmanuel.gendreau@upmc.fr
GENET Patricia	MC	Univ. Paris Cité	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 5e étage – bureau : 518	(+33) 01-44-27-38-09	patricia.genet@univ-paris-diderot.fr
GIGNOUX Jacques	DR	CNRS	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 210	(+33) 01-44-27-41-36	jacques.gignoux@upmc.fr
GIGON Agnès	IE	UPEC	Équipe BioDIS du Département DCFE	Univ. Paris Est Créteil bâtiment P – 4e étage – bureau : 422	(+33) 01-45-17-14-69	gigon@u-pec.fr
GOUNAND Isabelle	CR	CNRS	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-34 – 5e étage – bureau : 514	(+33) 01-44-27-45-26	isabelle.gounand@upmc.fr
GUERNIER Vanina	CR	IRD	Équipe CoMiC du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 408	(+33) 01-44-27-32-94	vanina.guernier@ird.fr
GUEYE Mamadou	CDD AI	IRD	Équipe BioDIS du Département DCFE	IRD Bondy bâtiment AB – 1er étage – bureau : 1	(+33) 01-48-02-55-31	mamadou.gueye@ird.fr
HARTMANN Christian	CR	IRD	Équipe BioDIS du Département DCFE	IRD Bondy bâtiment A – RDC – bureau : 114	(+33) 01-48-02-59-71	christian.hartmann@ird.fr
HENRY DES TUREAUX Thierry	AI	IRD	Équipe EMS du Département DCFE ; Équipe FEST du Département Sols_ZC	IRD Bondy bâtiment A – 1er étage – bureau : 102	(+33) 01-48-02-55-57	thierry.henry-des-tureaux@ird.fr
HUMBERT Jean-François	DR	INRAE	Équipe CoMiC du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 511	(+33) 01-44-27-41-67	jean-francois.humbert@upmc.fr
KRAEPIEL Yvan	MC	S-U	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 204	(+33) 01-44-27-41-32	yvan.kraepiel@sorbonne-universite.fr
LACROIX Gérard	CR	CNRS	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 5e étage – bureau : 514	(+33) 01-44-27-34-22	gerard.lacroix@upmc.fr
LAMY Dominique	MC	S-U	Équipe CoMiC du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 408	(+33) 01-44-27-41-67	dominique.lamy@sorbonne-universite.fr
LASSELIN Clément	Doctorant	S-U	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 218		clement.lasselin@sorbonne-universite.fr
LATA Jean-Christophe	PU	S-U	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 208	(+33) 01-44-27-47-42	jean-christophe.lata@upmc.fr
LELOUP Julie	MC	S-U	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 411	(+33) 01-44-27-38-26	julie.leloup@upmc.fr
LE NOË Julia	CR	IRD	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 214	(+33) 01-44-27-53-28	julia.lenoe@ird.fr
LERCH Thomas	MC	UPEC	Équipe BioDIS du Département DCFE	IRD Bondy bâtiment A – RDC – bureau : 1	(+33) 01-48-02-79-33	thomas.lerch@u-pec.fr
LE VILAIN Antoine	Doctorant	Univ. de Montpellier	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 413	(+33) 01-44-27-32-49	antoine.le_vilain@ens-paris-saclay.fr
LOEUILLE Nicolas	PU	S-U	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 5e étage – bureau : 504	(+33) 01-44-27-36-10	nicolas.loeuille@sorbonne-universite.fr
MARCANGELI Yoan	AI	CNRS	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 206	(+33) 01-44-27-47-95	yoan.marcangeli@upmc.fr
MATHIEU Jérôme	MC	S-U	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 5e étage – bureau : 514	(+33) 01-44-27-34-22	jerome.mathieu@upmc.fr
MEYER Sylvie	MC	Univ. Paris Cité	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 5e étage – bureau : 501		sylvie.meyer@universite-paris-saclay.fr
MIKAJLO Irina	Post-doctorante	IRD	Équipe BioDIS du Département DCFE ; Équipe F2ZC du Département Sols_ZC	IRD Bondy bâtiment A – RDC – bureau : A1	(+33) 01-48-02-55-90	irina.mikajlo@ird.fr
MOTARD Éric	T	CNRS	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 5e étage – bureau : 516	(+33) 01-44-27-70-58	eric.motard@sorbonne-universite.fr
NIBOYET Audrey	MC	AgroParisTech	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 214	(+33) 01-44-27-53-28	audrey.niboyet@agroparistech.fr
NOËL Shanèze	Doctorante	UPEC	Équipe BioDIS du Département DCFE	Univ. Paris Est Créteil bâtiment P – 4e étage – bureau : 409		shaneze.noel@u-pec.fr
NUNAN Naoise	DR	CNRS	Équipe BioDIS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 212	(+33) 01-44-27-41-06	naoise.nunan@upmc.fr
OUATTARA Waogninlin Amed	Doctorant	S-U et l’Univ. Nangui Abrogoua	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 220		waogninlinamed.ouattara@ird.fr
PANDO-BAHUON Anne	IR	IRD	Équipe BioDIS du Département DCFE	IRD Bondy bâtiment A – RDC – bureau : 1	(+33) 01-48-02-55-90	anne.pando@ird.fr
PERRARD Adrien	MC	Univ. Paris Cité	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 5e étage – bureau : 518	(+33) 01-40-79-38-09	adrien.perrard@univ-paris-diderot.fr
PRINTANIER Jean-Francois	CDD IE	IRD	Équipe BioDIS du Département DCFE	IRD Bondy bâtiment A – RDC – bureau : A114	(+33) 01-48-02-79-41	jean-francois.printanier@ird.fr
PÉDRON Jacques	MC	S-U	Équipe CoMiC du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 410	(+33) 01-44-27-41-67	jacques.pedron@upmc.fr
RAYNAUD Xavier	MC	S-U	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 204	(+33) 01-44-27-41-32	xavier.raynaud@sorbonne-universite.fr
ROCHA ARAUJO José	Post-doctorant	IRD	Équipe BioDIS du Département DCFE	IRD Bondy bâtiment B – Sous-sol étage – bureau : 8	(+33) 00-18-02-56-98	jose.araujo@ird.fr
ROCHELLE-NEWALL Emma	DR	IRD	Équipe CoMiC du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 404	(+33) 01-44-27-38-26	emma.rochelle-newall@ird.fr
ROY Virginie	MC	UPEC	Équipe BioDIS du Département DCFE	Univ. Paris Est Créteil bâtiment P – 4e étage – bureau : P4-420	(+33) 01-45-17-16-14	roy@u-pec.fr
SCHURR Lucie	MC	Univ. Paris Cité	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-34 – 5e étage – bureau : 514	(+33) 06-82-22-24-20	lucie.schurr@u-paris.fr
SEBILO Mathieu	MC	S-U	Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 56-66 – 4e étage – bureau : —	(+33) 01-44-27-50-04	mathieu.sebilo@sorbonne-universite.fr
SPATARO Thierry	MC	AgroParisTech	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 5e étage – bureau : 520	(+33) 01-44-27-25-69	spataro@agroparistech.fr
THOMACHOT Romain	Doctorant	S-U	Équipe EERI du Département DCFE ; Équipe EMS du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 4e étage – bureau : 413	(+33) 01-44-27-32-49	romain.thomachot@sorbonne-universite.fr
THÉBAULT Elisa	CR	CNRS	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 5e étage – bureau : 522	(+33) 01-44-27-56-71	elisa.thebault@upmc.fr
VENTURA Mathis	Doctorant	UPEC	Équipe BioDIS du Département DCFE	Univ. Paris Est Créteil bâtiment P – 4e étage – bureau : 409		mathis.ventura@u-pec.fr
VILLAIN Théo	Doctorant	S-U	Équipe EERI du Département DCFE	Campus Pierre et Marie Curie – Paris 5e 44-45 – 4e étage – bureau : 413	(+33) 01-44-27-23-49	theo.villain@sorbonne-universite.fr

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Département Diversité des Communautés et Fonctionnement des Écosystèmes "DCFE" - iEES Paris

Équipes du département "DCFE"

Biogéographie et Diversité des Interactions du Sol

Communautés Microbiennes dans les écosystèmes Continentaux

Écologie et Évolution des Réseaux d’Interactions

Écologie intégrative : des Mécanismes aux Services écosystémiques

Actualités du département

IRD – La journée mondiale des sols

Brut nature – Les vers plats, carnivores et invasifs, menacent la France

Le Monde – « Les vers de terre sont des alliés plus précieux que le glyphosate pour la santé de notre planète et de ses habitants »

Conference on Soils of Urban, Industrial, Traffic, Mining and Military Areas

The Conversation – Des vers de terre qui ne vivent pas dans la terre découverts en Martinique

20 minutes – C’est quoi les cyanobactéries, responsables de la fermeture de plans d’eau en Ile-de-France ?

Le Monde – Le concept d’espèce utile ou nuisible est scientifiquement dépassé

France inter – Nouveaux polluants détectés dans l’eau potable : des milliers de captages en sursis

Publications du département

Ne concerne que les publications de 2017 à aujourd’hui. Pour voir toutes les publications dirigez-vous vers la page Publications.

Membres du département